Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes TCAF1
  • Mouse genes Tcaf1
  • Rat genes Tcaf1
  • Zfish genes si:ch211-210b2.2,si:ch211-210b2.3,si:ch211-210b2.4,zgc:162193
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Tcaf1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	TCAF1	IPI	UniProtKB:Q15427	Human	PMID:16189514
Molecular Function	GO:0005515	protein binding	TCAF1	IPI	UniProtKB:Q15427	Human	PMID:21516116
Molecular Function	GO:0005515	protein binding	TCAF1	IPI	UniProtKB:Q9UKT9	Human	PMID:21516116
Molecular Function	GO:0005515	protein binding	TCAF1	IPI	UniProtKB:O14978	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	TCAF1	IPI	UniProtKB:O43597	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	TCAF1	IPI	UniProtKB:P15923	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	TCAF1	IPI	UniProtKB:P17028	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	TCAF1	IPI	UniProtKB:Q15427	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	TCAF1	IPI	UniProtKB:Q15654	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	TCAF1	IPI	UniProtKB:Q92610	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	TCAF1	IPI	UniProtKB:Q9UBB9	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	TCAF1	IPI	UniProtKB:Q9UKT9	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	TCAF1	IPI	UniProtKB:Q9UKT9	Human	PMID:31515488
Molecular Function	GO:0044325	transmembrane transporter binding	TCAF1	IDA		Human	PMID:25559186
Molecular Function	GO:0044325	transmembrane transporter binding	TCAF1	IPI	UniProtKB:Q9H1D0	Human	PMID:25559186
Cellular Component	GO:0005886	plasma membrane	TCAF1	IDA		Human	PMID:25559186
Biological Process	GO:0030336	negative regulation of cell migration	TCAF1	IDA		Human	PMID:25559186
Biological Process	GO:1901529	positive regulation of anion channel activity	TCAF1	IDA		Human	PMID:25559186
Biological Process	GO:0090314	positive regulation of protein targeting to membrane	TCAF1	IMP		Human	PMID:25559186

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern