Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes TCAF2,TCAF2C
  • Mouse genes Tcaf3
  • Rat genes Fam115e
  • Zfish genes si:ch211-210b2.2,si:ch211-210b2.3,si:ch211-210b2.4,zgc:162193
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Tcaf3

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	Tcaf3	IPI	PR:Q8R4D5	Mouse	PMID:25559186
Molecular Function	GO:0044325	transmembrane transporter binding	TCAF2	IDA		Human	PMID:25559186
Molecular Function	GO:0044325	transmembrane transporter binding	TCAF2	IPI	UniProtKB:Q7Z2W7	Human	PMID:25559186
Cellular Component	GO:0030054	cell junction	TCAF2C	IDA		Human	GO_REF:0000052
Cellular Component	GO:0030054	cell junction	TCAF2	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005886	plasma membrane	TCAF2C	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005886	plasma membrane	TCAF2	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005886	plasma membrane	TCAF2	IDA		Human	PMID:25559186
Biological Process	GO:0010360	negative regulation of anion channel activity	TCAF2	IDA		Human	PMID:25559186
Biological Process	GO:0030335	positive regulation of cell migration	TCAF2	IDA		Human	PMID:25559186
Biological Process	GO:0090314	positive regulation of protein targeting to membrane	TCAF2	IMP		Human	PMID:25559186

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern