Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes TDRD3
  • Mouse genes Tdrd3
  • Rat genes Tdrd3
  • Zfish genes tdrd3
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Tdrd3

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0003682	chromatin binding	TDRD3	IDA		Human	PMID:21172665
Molecular Function	GO:0035064	methylated histone binding	TDRD3	IDA		Human	PMID:21172665
Molecular Function	GO:0005515	protein binding	TDRD3	IPI	UniProtKB:P24928	Human	PMID:23066109
Molecular Function	GO:0005515	protein binding	TDRD3	IPI	UniProtKB:P24928	Human	PMID:26700805
Molecular Function	GO:0003723	RNA binding	TDRD3	HDA		Human	PMID:22658674
Molecular Function	GO:0003723	RNA binding	TDRD3	HDA		Human	PMID:22681889
Molecular Function	GO:0003713	transcription coactivator activity	TDRD3	IDA		Human	PMID:21172665
Cellular Component	GO:0005829	cytosol	TDRD3	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005794	Golgi apparatus	TDRD3	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005654	nucleoplasm	TDRD3	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005634	nucleus	TDRD3	IDA		Human	PMID:21172665

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern