Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes TDRKH
  • Mouse genes Tdrkh
  • Rat genes Tdrkh
  • Zfish genes tdrkh
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Tdrkh

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	TDRKH	IPI	UniProtKB:B3EWG5	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TDRKH	IPI	UniProtKB:Q8NCN2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TDRKH	IPI	UniProtKB:Q8TF47	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TDRKH	IPI	UniProtKB:Q9BV90	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TDRKH	IPI	UniProtKB:Q9NS86	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	Tdrkh	IPI	UniProtKB:Q8CGT6|UniProtKB:Q9JMB7	Mouse	MGI:MGI:5494327|PMID:23714778
Molecular Function	GO:0005515	protein binding	Tdrkh	IPI	PR:Q9JMB7	Mouse	PMID:19918066
Cellular Component	GO:0005737	cytoplasm	Tdrkh	IDA		Mouse	PMID:19918066
Cellular Component	GO:0005739	mitochondrion	Tdrkh	IDA		Mouse	MGI:MGI:5494327|PMID:23714778
Cellular Component	GO:0005739	mitochondrion	Tdrkh	HDA		Mouse	PMID:18614015
Cellular Component	GO:0071546	pi-body	Tdrkh	IDA		Mouse	MGI:MGI:5494327|PMID:23714778
Cellular Component	GO:0071547	piP-body	Tdrkh	IDA		Mouse	MGI:MGI:5494327|PMID:23714778
Biological Process	GO:0009566	fertilization	Tdrkh	IMP		Mouse	MGI:MGI:5494327|PMID:23714778
Biological Process	GO:0007140	male meiotic nuclear division	Tdrkh	IMP		Mouse	MGI:MGI:5494327|PMID:23714778
Biological Process	GO:0034587	piRNA processing	Tdrkh	IMP		Mouse	MGI:MGI:5494327|PMID:23714778
Biological Process	GO:0007283	spermatogenesis	Tdrkh	IMP		Mouse	MGI:MGI:5494327|PMID:23714778

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern