Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes TENT4B
  • Mouse genes Tent4b
  • Rat genes Tent4b
  • Zfish genes tent4b
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Tent4b

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0070568	guanylyltransferase activity	TENT4B	IMP		Human	PMID:30026317
Molecular Function	GO:1990817	poly(A) RNA polymerase activity	TENT4B	IDA		Human	PMID:28383716
Molecular Function	GO:0005515	protein binding	TENT4B	IPI	UniProtKB:Q9BZB8	Human	PMID:28383716
Molecular Function	GO:0003723	RNA binding	TENT4B	HDA		Human	PMID:22658674
Molecular Function	GO:0003723	RNA binding	TENT4B	HDA		Human	PMID:22681889
Cellular Component	GO:0005737	cytoplasm	TENT4B	IDA		Human	PMID:28383716
Cellular Component	GO:0005829	cytosol	TENT4B	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005730	nucleolus	TENT4B	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005730	nucleolus	TENT4B	IDA		Human	PMID:21855801
Cellular Component	GO:0005886	plasma membrane	TENT4B	IDA		Human	GO_REF:0000052
Cellular Component	GO:0031499	TRAMP complex	TENT4B	IDA		Human	PMID:21855801
Biological Process	GO:0033500	carbohydrate homeostasis	TENT4B	IMP		Human	PMID:28383716
Biological Process	GO:0071044	histone mRNA catabolic process	TENT4B	IMP		Human	PMID:18172165
Biological Process	GO:0010587	miRNA catabolic process	TENT4B	IDA		Human	PMID:25049417
Biological Process	GO:0006378	mRNA polyadenylation	TENT4B	IDA		Human	PMID:28383716
Biological Process	GO:0043629	ncRNA polyadenylation	TENT4B	IDA		Human	PMID:25049417
Biological Process	GO:0043630	ncRNA polyadenylation involved in polyadenylation-dependent ncRNA catabolic process	TENT4B	IMP		Human	PMID:26950371
Biological Process	GO:0060212	negative regulation of nuclear-transcribed mRNA poly(A) tail shortening	TENT4B	IMP		Human	PMID:30026317
Biological Process	GO:0032211	negative regulation of telomere maintenance via telomerase	TENT4B	IMP		Human	PMID:26950371
Biological Process	GO:1905870	positive regulation of 3'-UTR-mediated mRNA stabilization	TENT4B	IMP		Human	PMID:30026317
Biological Process	GO:0071076	RNA 3' uridylation	TENT4B	IMP		Human	PMID:30026317
Biological Process	GO:0071050	sno(s)RNA polyadenylation	TENT4B	IDA		Human	PMID:22442037

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern