Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes TES
  • Mouse genes Tes
  • Rat genes Tes
  • Zfish genes tes
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Tes

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0045296	cadherin binding	TES	HDA		Human	PMID:25468996
Molecular Function	GO:0005515	protein binding	TES	IPI	UniProtKB:Q8N8S7	Human	PMID:21278383
Molecular Function	GO:0005515	protein binding	TES	IPI	UniProtKB:Q9Y615	Human	PMID:21278383
Molecular Function	GO:0005515	protein binding	TES	IPI	UniProtKB:Q7Z699	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	Tes	IPI	RGD:1304697|RGD:1307666	Rat	PMID:21278383|RGD:7247437
Molecular Function	GO:0003723	RNA binding	TES	HDA		Human	PMID:22658674
Molecular Function	GO:0008270	zinc ion binding	TES	IDA		Human	PMID:21278383
Cellular Component	GO:0030054	cell junction	TES	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005737	cytoplasm	Tes	IDA		Mouse	MGI:MGI:5285134|PMID:21278383
Cellular Component	GO:0005829	cytosol	TES	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005925	focal adhesion	TES	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005925	focal adhesion	TES	HDA		Human	PMID:21423176
Cellular Component	GO:0005634	nucleus	TES	HDA		Human	PMID:21630459
Cellular Component	GO:0005886	plasma membrane	TES	IDA		Human	GO_REF:0000052
Cellular Component	GO:0032991	protein-containing complex	TES	IDA		Human	PMID:21278383
Biological Process	GO:0008285	negative regulation of cell population proliferation	TES	IMP		Human	PMID:11420696

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern