Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes TFDP1,TFDP3
  • Mouse genes Tfdp1
  • Rat genes Tfdp1
  • Zfish genes tfdp1a,tfdp1b
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Tfdp1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0000987	cis-regulatory region sequence-specific DNA binding	Tfdp1	IDA		Mouse	PMID:15448153
Molecular Function	GO:0001228	DNA-binding transcription activator activity, RNA polymerase II-specific	TFDP1	IDA		Human	PMID:7739537
Molecular Function	GO:0003700	DNA-binding transcription factor activity	Tfdp1	IDA		Mouse	PMID:14667810
Molecular Function	GO:0140297	DNA-binding transcription factor binding	TFDP1	IPI	UniProtKB:Q01094	Human	PMID:16360038
Molecular Function	GO:0140297	DNA-binding transcription factor binding	TFDP1	IPI	UniProtKB:Q14209	Human	PMID:16360038
Molecular Function	GO:0140297	DNA-binding transcription factor binding	TFDP1	IPI	UniProtKB:Q15329	Human	PMID:16360038
Molecular Function	GO:0140297	DNA-binding transcription factor binding	TFDP1	IPI	UniProtKB:P05554	Human	PMID:20176812
Molecular Function	GO:0140297	DNA-binding transcription factor binding	TFDP3	IPI	UniProtKB:O00716	Human	PMID:17062573
Molecular Function	GO:0140297	DNA-binding transcription factor binding	TFDP3	IPI	UniProtKB:Q01094	Human	PMID:17062573
Molecular Function	GO:0140297	DNA-binding transcription factor binding	TFDP3	IPI	UniProtKB:Q15329	Human	PMID:17062573
Molecular Function	GO:0140297	DNA-binding transcription factor binding	TFDP3	IPI	UniProtKB:Q16254	Human	PMID:17062573
Molecular Function	GO:0005515	protein binding	TFDP1	IPI	UniProtKB:O75461	Human	PMID:16189514
Molecular Function	GO:0005515	protein binding	TFDP1	IPI	UniProtKB:Q01094	Human	PMID:16360038
Molecular Function	GO:0005515	protein binding	TFDP1	IPI	UniProtKB:Q16254	Human	PMID:16360038
Molecular Function	GO:0005515	protein binding	TFDP1	IPI	UniProtKB:O75461	Human	PMID:20211142
Molecular Function	GO:0005515	protein binding	TFDP1	IPI	UniProtKB:Q01094	Human	PMID:20211142
Molecular Function	GO:0005515	protein binding	TFDP1	IPI	UniProtKB:Q14209	Human	PMID:20211142
Molecular Function	GO:0005515	protein binding	TFDP1	IPI	UniProtKB:Q01094	Human	PMID:22327218
Molecular Function	GO:0005515	protein binding	TFDP1	IPI	UniProtKB:O14640	Human	PMID:22773187
Molecular Function	GO:0005515	protein binding	TFDP1	IPI	UniProtKB:Q9UBE8	Human	PMID:22773187
Molecular Function	GO:0005515	protein binding	TFDP1	IPI	UniProtKB:O75461	Human	PMID:24981860
Molecular Function	GO:0005515	protein binding	TFDP1	IPI	UniProtKB:P61244	Human	PMID:24981860
Molecular Function	GO:0005515	protein binding	TFDP1	IPI	UniProtKB:Q01094	Human	PMID:24981860
Molecular Function	GO:0005515	protein binding	TFDP1	IPI	UniProtKB:Q14209	Human	PMID:24981860
Molecular Function	GO:0005515	protein binding	TFDP1	IPI	UniProtKB:Q16254	Human	PMID:24981860
Molecular Function	GO:0005515	protein binding	TFDP1	IPI	UniProtKB:O75461	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	TFDP1	IPI	UniProtKB:P61244	Human	PMID:25609649
Molecular Function	GO:0005515	protein binding	TFDP1	IPI	UniProtKB:O75461	Human	PMID:26871637
Molecular Function	GO:0005515	protein binding	TFDP1	IPI	UniProtKB:O75461	Human	PMID:27705803
Molecular Function	GO:0005515	protein binding	TFDP1	IPI	UniProtKB:P61244	Human	PMID:27705803
Molecular Function	GO:0005515	protein binding	TFDP1	IPI	UniProtKB:Q01094	Human	PMID:27705803
Molecular Function	GO:0005515	protein binding	TFDP1	IPI	UniProtKB:Q14209	Human	PMID:27705803
Molecular Function	GO:0005515	protein binding	TFDP1	IPI	UniProtKB:Q16254	Human	PMID:27705803
Molecular Function	GO:0005515	protein binding	TFDP1	IPI	UniProtKB:O75461	Human	PMID:28514442
Molecular Function	GO:0005515	protein binding	TFDP1	IPI	UniProtKB:O75461	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TFDP1	IPI	UniProtKB:Q16254	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TFDP1	IPI	UniProtKB:Q01094	Human	PMID:35140242
Molecular Function	GO:0005515	protein binding	Tfdp1	IPI	UniProtKB:P51141	Mouse	MGI:MGI:5440825|PMID:22773187
Molecular Function	GO:0005515	protein binding	Tfdp1	IPI	UniProtKB:Q9D783	Mouse	MGI:MGI:5700633|PMID:25940086
Molecular Function	GO:0005515	protein binding	Tfdp1	IPI	PR:Q9JL10	Mouse	PMID:11331592
Molecular Function	GO:0005515	protein binding	Tfdp1	IPI	PR:P56931	Mouse	PMID:15448153
Molecular Function	GO:0005515	protein binding	Tfdp1	IPI	PR:Q9JJG5	Mouse	PMID:11331592
Molecular Function	GO:0005515	protein binding	Tfdp1	IPI	PR:Q8R0K9	Mouse	PMID:15448153
Molecular Function	GO:0005515	protein binding	Tfdp1	IPI	PR:Q61502	Mouse	PMID:15448153
Molecular Function	GO:0005515	protein binding	Tfdp1	IPI	PR:O35261	Mouse	PMID:15448153
Molecular Function	GO:0005515	protein binding	Tfdp1	IPI	PR:Q61501	Mouse	PMID:15448153
Molecular Function	GO:0019904	protein domain specific binding	TFDP1	IPI	UniProtKB:P06400	Human	PMID:16360038
Molecular Function	GO:0019904	protein domain specific binding	TFDP1	IPI	UniProtKB:P28749	Human	PMID:16360038
Molecular Function	GO:0000977	RNA polymerase II transcription regulatory region sequence-specific DNA binding	TFDP1	IDA		Human	PMID:7739537
Molecular Function	GO:0061629	RNA polymerase II-specific DNA-binding transcription factor binding	TFDP3	IPI	UniProtKB:O75461	Human	PMID:17062573
Molecular Function	GO:0061629	RNA polymerase II-specific DNA-binding transcription factor binding	TFDP3	IPI	UniProtKB:Q14209	Human	PMID:17062573
Molecular Function	GO:0140416	transcription regulator inhibitor activity	TFDP3	IDA		Human	PMID:17062573
Cellular Component	GO:0005737	cytoplasm	TFDP1	IDA		Human	PMID:17062573
Cellular Component	GO:0005737	cytoplasm	TFDP3	IDA		Human	PMID:17062573
Cellular Component	GO:0005737	cytoplasm	Tfdp1	IDA		Mouse	MGI:MGI:5700633|PMID:25940086
Cellular Component	GO:0005829	cytosol	TFDP1	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005654	nucleoplasm	TFDP1	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005634	nucleus	Tfdp1	IDA		Mouse	MGI:MGI:5700633|PMID:25940086
Cellular Component	GO:0005634	nucleus	Tfdp1	IDA		Mouse	PMID:10082561
Cellular Component	GO:0035189	Rb-E2F complex	TFDP1	IPI		Human	PMID:16360038
Cellular Component	GO:0090575	RNA polymerase II transcription regulator complex	TFDP1	IPI		Human	PMID:16360038
Cellular Component	GO:0090575	RNA polymerase II transcription regulator complex	TFDP1	IDA		Human	PMID:7739537
Cellular Component	GO:0005667	transcription regulator complex	Tfdp1	IDA		Mouse	PMID:10082561
Biological Process	GO:0043276	anoikis	Tfdp1	IDA		Mouse	PMID:14667810
Biological Process	GO:0006974	DNA damage response	TFDP3	IDA		Human	PMID:20559320
Biological Process	GO:0008544	epidermis development	Tfdp1	IMP		Mouse	PMID:15448153
Biological Process	GO:0043433	negative regulation of DNA-binding transcription factor activity	TFDP1	IDA		Human	PMID:1531329
Biological Process	GO:0043433	negative regulation of DNA-binding transcription factor activity	TFDP3	IDA		Human	PMID:17062573
Biological Process	GO:0070345	negative regulation of fat cell proliferation	Tfdp1	IMP		Mouse	MGI:MGI:4461077|PMID:20176812
Biological Process	GO:2000134	negative regulation of G1/S transition of mitotic cell cycle	TFDP3	IDA		Human	PMID:17062573
Biological Process	GO:0051091	positive regulation of DNA-binding transcription factor activity	TFDP1	IDA		Human	PMID:17062573
Biological Process	GO:0045893	positive regulation of DNA-templated transcription	Tfdp1	IDA		Mouse	PMID:11331592
Biological Process	GO:1900087	positive regulation of G1/S transition of mitotic cell cycle	TFDP1	IDA		Human	PMID:17062573
Biological Process	GO:0045944	positive regulation of transcription by RNA polymerase II	TFDP1	IDA		Human	PMID:7739537
Biological Process	GO:0045944	positive regulation of transcription by RNA polymerase II	Tfdp1	IGI	MGI:MGI:101941	Mouse	PMID:7797074
Biological Process	GO:0045944	positive regulation of transcription by RNA polymerase II	Tfdp1	IGI	MGI:MGI:103012	Mouse	PMID:7797074
Biological Process	GO:2000278	regulation of DNA biosynthetic process	Tfdp1	IMP		Mouse	PMID:15448153
Biological Process	GO:0006355	regulation of DNA-templated transcription	Tfdp1	IDA		Mouse	PMID:14667810
Biological Process	GO:0000083	regulation of transcription involved in G1/S transition of mitotic cell cycle	TFDP1	IDA		Human	PMID:23934193
Biological Process	GO:0006366	transcription by RNA polymerase II	TFDP1	IMP		Human	PMID:27825926

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern