Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes TFDP2
  • Mouse genes Tfdp2
  • Rat genes Tfdp2
  • Zfish genes tfdp2
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Tfdp2

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0001228	DNA-binding transcription activator activity, RNA polymerase II-specific	TFDP2	IDA		Human	PMID:7739537
Molecular Function	GO:0003700	DNA-binding transcription factor activity	Tfdp2	IDA		Mouse	PMID:11591818
Molecular Function	GO:0005515	protein binding	TFDP2	IPI	UniProtKB:P03129	Human	PMID:16061792
Molecular Function	GO:0005515	protein binding	TFDP2	IPI	UniProtKB:O75461	Human	PMID:16189514
Molecular Function	GO:0005515	protein binding	TFDP2	IPI	UniProtKB:Q16254	Human	PMID:16360038
Molecular Function	GO:0005515	protein binding	TFDP2	IPI	UniProtKB:P05554	Human	PMID:20176812
Molecular Function	GO:0005515	protein binding	TFDP2	IPI	UniProtKB:O75461	Human	PMID:21516116
Molecular Function	GO:0005515	protein binding	TFDP2	IPI	UniProtKB:P03129	Human	PMID:22810586
Molecular Function	GO:0005515	protein binding	TFDP2	IPI	UniProtKB:O75461	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	TFDP2	IPI	UniProtKB:O75461	Human	PMID:27705803
Molecular Function	GO:0005515	protein binding	TFDP2	IPI	UniProtKB:O75461	Human	PMID:28514442
Molecular Function	GO:0005515	protein binding	Tfdp2	IPI	UniProtKB:P62259|UniProtKB:Q61502	Mouse	MGI:MGI:5508255|PMID:16482218
Molecular Function	GO:0019904	protein domain specific binding	TFDP2	IPI	UniProtKB:P06400	Human	PMID:16360038
Molecular Function	GO:0000977	RNA polymerase II transcription regulatory region sequence-specific DNA binding	TFDP2	IDA		Human	PMID:7739537
Molecular Function	GO:0000977	RNA polymerase II transcription regulatory region sequence-specific DNA binding	TFDP2	IDA		Human	PMID:9501179
Molecular Function	GO:0008134	transcription factor binding	TFDP2	IPI	UniProtKB:Q01094	Human	PMID:7784053
Cellular Component	GO:0072686	mitotic spindle	TFDP2	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005654	nucleoplasm	TFDP2	IDA		Human	GO_REF:0000052
Cellular Component	GO:0090575	RNA polymerase II transcription regulator complex	TFDP2	IDA		Human	PMID:7739537
Cellular Component	GO:0090575	RNA polymerase II transcription regulator complex	TFDP2	IDA		Human	PMID:9501179
Biological Process	GO:0006351	DNA-templated transcription	Tfdp2	IDA		Mouse	MGI:MGI:2159164|PMID:11591818
Biological Process	GO:0007507	heart development	Tfdp2	IEP		Rat	PMID:12682052|RGD:1581724
Biological Process	GO:0045892	negative regulation of DNA-templated transcription	TFDP2	IDA		Human	PMID:20176812
Biological Process	GO:0045944	positive regulation of transcription by RNA polymerase II	TFDP2	IDA		Human	PMID:7739537
Biological Process	GO:0006355	regulation of DNA-templated transcription	Tfdp2	IDA		Mouse	PMID:11591818

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern