Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes TGFBRAP1
  • Mouse genes Tgfbrap1
  • Rat genes Tgfbrap1
  • Zfish genes tgfbrap1
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Tgfbrap1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	TGFBRAP1	IPI	UniProtKB:P36894	Human	PMID:11278302
Molecular Function	GO:0005515	protein binding	TGFBRAP1	IPI	UniProtKB:P36896	Human	PMID:11278302
Molecular Function	GO:0005515	protein binding	TGFBRAP1	IPI	UniProtKB:P36897	Human	PMID:11278302
Molecular Function	GO:0005515	protein binding	TGFBRAP1	IPI	UniProtKB:P37023	Human	PMID:11278302
Molecular Function	GO:0005515	protein binding	TGFBRAP1	IPI	UniProtKB:P37173	Human	PMID:11278302
Molecular Function	GO:0005515	protein binding	TGFBRAP1	IPI	UniProtKB:Q13485	Human	PMID:11278302
Molecular Function	GO:0005515	protein binding	TGFBRAP1	IPI	UniProtKB:Q13705	Human	PMID:11278302
Molecular Function	GO:0005515	protein binding	TGFBRAP1	IPI	UniProtKB:Q8N3P4	Human	PMID:25266290
Molecular Function	GO:0005515	protein binding	TGFBRAP1	IPI	UniProtKB:Q9H269	Human	PMID:25266290
Molecular Function	GO:0005515	protein binding	TGFBRAP1	IPI	UniProtKB:Q9H270	Human	PMID:25266290
Molecular Function	GO:0005515	protein binding	TGFBRAP1	IPI	UniProtKB:Q9H269	Human	PMID:26496610
Molecular Function	GO:0005515	protein binding	TGFBRAP1	IPI	UniProtKB:Q9H270	Human	PMID:26496610
Molecular Function	GO:0005515	protein binding	TGFBRAP1	IPI	UniProtKB:Q9H270	Human	PMID:28514442
Molecular Function	GO:0046332	SMAD binding	TGFBRAP1	IDA		Human	PMID:11278302
Molecular Function	GO:0005160	transforming growth factor beta receptor binding	TGFBRAP1	IDA		Human	PMID:11278302
Cellular Component	GO:0033263	CORVET complex	Tgfbrap1	IDA		Mouse	MGI:MGI:5645189|PMID:25266290
Cellular Component	GO:0005769	early endosome	TGFBRAP1	IDA		Human	PMID:25266290
Cellular Component	GO:0043231	intracellular membrane-bounded organelle	TGFBRAP1	IDA		Human	GO_REF:0000052
Cellular Component	GO:0016020	membrane	TGFBRAP1	IDA		Human	PMID:11278302
Biological Process	GO:0034058	endosomal vesicle fusion	TGFBRAP1	IMP		Human	PMID:25266290
Biological Process	GO:0008333	endosome to lysosome transport	TGFBRAP1	IMP		Human	PMID:25266290
Biological Process	GO:0006355	regulation of DNA-templated transcription	TGFBRAP1	IDA		Human	PMID:11278302
Biological Process	GO:0007165	signal transduction	TGFBRAP1	IDA		Human	PMID:11278302

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern