Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes TGM1
  • Mouse genes Tgm1
  • Rat genes Tgm1
  • Zfish genes tgm1,tgm1l1,tgm1l2,tgm1l3,tgm1l4
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Tgm1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0042802	identical protein binding	TGM1	IPI	UniProtKB:P22735	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TGM1	IPI	UniProtKB:P35321	Human	PMID:10066784
Molecular Function	GO:0005515	protein binding	TGM1	IPI	UniProtKB:O09116	Human	PMID:10510474
Molecular Function	GO:0005515	protein binding	TGM1	IPI	UniProtKB:Q9UBC9	Human	PMID:10510474
Molecular Function	GO:0005515	protein binding	TGM1	IPI	UniProtKB:Q9UL19	Human	PMID:17762858
Molecular Function	GO:0005515	protein binding	TGM1	IPI	UniProtKB:B2RWP4	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TGM1	IPI	UniProtKB:P05187	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TGM1	IPI	UniProtKB:P09211	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TGM1	IPI	UniProtKB:P13284	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TGM1	IPI	UniProtKB:P16144-2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TGM1	IPI	UniProtKB:P26371	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TGM1	IPI	UniProtKB:P28330	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TGM1	IPI	UniProtKB:Q14162	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TGM1	IPI	UniProtKB:Q15040	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TGM1	IPI	UniProtKB:Q5T753	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TGM1	IPI	UniProtKB:Q5T7P3	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TGM1	IPI	UniProtKB:Q5TA76	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TGM1	IPI	UniProtKB:Q5TA78	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TGM1	IPI	UniProtKB:Q6EMK4	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TGM1	IPI	UniProtKB:Q86VE0	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TGM1	IPI	UniProtKB:Q8IW00	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TGM1	IPI	UniProtKB:Q8NE01	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TGM1	IPI	UniProtKB:Q8WVR3	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TGM1	IPI	UniProtKB:Q92608	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TGM1	IPI	UniProtKB:Q92692-2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TGM1	IPI	UniProtKB:Q969P0	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TGM1	IPI	UniProtKB:Q9BQ66	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TGM1	IPI	UniProtKB:Q9BR01	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TGM1	IPI	UniProtKB:Q9BXJ1-2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TGM1	IPI	UniProtKB:Q9UGL9	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TGM1	IPI	UniProtKB:Q9Y5Y2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TGM1	IPI	UniProtKB:O75400-2	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	TGM1	IPI	UniProtKB:P13473-2	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	TGM1	IPI	UniProtKB:P55212	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	TGM1	IPI	UniProtKB:Q9Y371	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	TGM1	IPI	UniProtKB:P23490	Human	PMID:7592852
Molecular Function	GO:0005515	protein binding	TGM1	IPI	UniProtKB:P22531	Human	PMID:9722562
Molecular Function	GO:0003810	protein-glutamine gamma-glutamyltransferase activity	TGM1	IDA		Human	PMID:21282207
Molecular Function	GO:0003810	protein-glutamine gamma-glutamyltransferase activity	TGM1	IDA		Human	PMID:7961731
Molecular Function	GO:0003810	protein-glutamine gamma-glutamyltransferase activity	TGM1	IDA		Human	PMID:9722562
Cellular Component	GO:0005912	adherens junction	Tgm1	IDA		Mouse	PMID:10567386
Cellular Component	GO:0070062	extracellular exosome	TGM1	HDA		Human	PMID:19199708
Cellular Component	GO:0016020	membrane	TGM1	IDA		Human	PMID:17762858
Cellular Component	GO:0016020	membrane	TGM1	IDA		Human	PMID:8824274
Biological Process	GO:0009887	animal organ morphogenesis	Tgm1	IMP		Mouse	PMID:10567386
Biological Process	GO:0030216	keratinocyte differentiation	TGM1	IDA		Human	PMID:8824274
Biological Process	GO:0018149	peptide cross-linking	TGM1	IDA		Human	PMID:9722562
Biological Process	GO:0045787	positive regulation of cell cycle	TGM1	IMP		Human	PMID:26220141
Biological Process	GO:0010838	positive regulation of keratinocyte proliferation	TGM1	IMP		Human	PMID:26220141

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern