Comparative GO Graph (mouse, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes
  • Mouse genes Tgtp1
  • Rat genes
  • Zfish genes irgf1,irgf3,si:ch73-171o20.1
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Tgtp1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0003924	GTPase activity	Tgtp1	IDA		Mouse	PMID:9725230
Biological Process	GO:0035458	cellular response to interferon-beta	Tgtp1	IDA		Mouse	PMID:19158679
Biological Process	GO:0042832	defense response to protozoan	Tgtp1	IDA		Mouse	MGI:MGI:7434530|PMID:20109161
Biological Process	GO:0009617	response to bacterium	Tgtp1	IEP		Mouse	PMID:23012479
Biological Process	GO:0035455	response to interferon-alpha	Tgtp1	IDA		Mouse	PMID:9725230
Biological Process	GO:0034341	response to type II interferon	Tgtp1	IDA		Mouse	PMID:9725230
Biological Process	GO:0009615	response to virus	Tgtp1	IDA		Mouse	MGI:MGI:3687728|PMID:9725230

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern