Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes THEMIS
  • Mouse genes Themis
  • Rat genes Themis
  • Zfish genes themis
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Themis

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	THEMIS	IPI	UniProtKB:P62993	Human	PMID:21189249
Molecular Function	GO:0005515	protein binding	THEMIS	IPI	UniProtKB:Q96LA8	Human	PMID:23455924
Molecular Function	GO:0005515	protein binding	THEMIS	IPI	UniProtKB:P29350	Human	PMID:25535246
Molecular Function	GO:0005515	protein binding	THEMIS	IPI	UniProtKB:P62993	Human	PMID:25535246
Molecular Function	GO:0005515	protein binding	THEMIS	IPI	UniProtKB:P0C745	Human	PMID:28046066
Molecular Function	GO:0005515	protein binding	THEMIS	IPI	UniProtKB:P62993	Human	PMID:28046066
Molecular Function	GO:0005515	protein binding	Themis	IPI	UniProtKB:Q03526|UniProtKB:Q62077	Mouse	MGI:MGI:4352756|PMID:19597499
Molecular Function	GO:0005515	protein binding	Themis	IPI	UniProtKB:Q60631	Mouse	MGI:MGI:4352757|PMID:19597498
Molecular Function	GO:0005515	protein binding	Themis	IPI	UniProtKB:Q60631-1	Mouse	MGI:MGI:4361774|PMID:19805304
Molecular Function	GO:0005515	protein binding	Themis	IPI	UniProtKB:Q60631	Mouse	MGI:MGI:4361774|PMID:19805304
Molecular Function	GO:0005515	protein binding	Themis	IPI	UniProtKB:Q60631	Mouse	MGI:MGI:4352758|PMID:19597497
Molecular Function	GO:0005515	protein binding	Themis	IPI	PR:O54957	Mouse	PMID:22732588
Molecular Function	GO:0005515	protein binding	Themis	IPI	PR:Q62245	Mouse	PMID:22732588
Molecular Function	GO:0005515	protein binding	Themis	IPI	MGI:MGI:98923	Mouse	PMID:22732588
Molecular Function	GO:0005515	protein binding	Themis	IPI	PR:Q60631	Mouse	PMID:22732588
Cellular Component	GO:0005911	cell-cell junction	Themis	IDA		Mouse	PMID:23793062
Cellular Component	GO:0008180	COP9 signalosome	Themis	IDA		Mouse	MGI:MGI:5432321|PMID:22561606
Cellular Component	GO:0005737	cytoplasm	Themis	IDA		Mouse	MGI:MGI:4352758|PMID:19597497
Cellular Component	GO:0005737	cytoplasm	Themis	IDA		Mouse	MGI:MGI:4352757|PMID:19597498
Cellular Component	GO:0005634	nucleus	Themis	IDA		Mouse	MGI:MGI:4352758|PMID:19597497
Cellular Component	GO:0005634	nucleus	Themis	IDA		Mouse	MGI:MGI:4352757|PMID:19597498
Biological Process	GO:0043383	negative T cell selection	Themis	IMP		Mouse	MGI:MGI:4352757|PMID:19597498
Biological Process	GO:0043383	negative T cell selection	Themis	IMP		Mouse	MGI:MGI:4352756|PMID:19597499
Biological Process	GO:0043368	positive T cell selection	Themis	IMP		Mouse	MGI:MGI:4352756|PMID:19597499
Biological Process	GO:0043368	positive T cell selection	Themis	IMP		Mouse	MGI:MGI:4352757|PMID:19597498
Biological Process	GO:0043368	positive T cell selection	Themis	IMP		Mouse	MGI:MGI:4352758|PMID:19597497
Biological Process	GO:0043368	positive T cell selection	Themis	IMP		Mouse	MGI:MGI:4361774|PMID:19805304
Biological Process	GO:0050852	T cell receptor signaling pathway	Themis	IMP		Mouse	MGI:MGI:4352756|PMID:19597499
Biological Process	GO:0050852	T cell receptor signaling pathway	Themis	IMP		Mouse	MGI:MGI:4352757|PMID:19597498

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern