Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes THOC6
  • Mouse genes Thoc6
  • Rat genes Thoc6
  • Zfish genes thoc6
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Thoc6

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	Thoc6	IPI	PR:B1AZI6	Mouse	PMID:24315442
Cellular Component	GO:0000781	chromosome, telomeric region	THOC6	IDA		Human	PMID:24270157
Cellular Component	GO:0016604	nuclear body	THOC6	IDA		Human	GO_REF:0000052
Cellular Component	GO:0016607	nuclear speck	THOC6	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005654	nucleoplasm	THOC6	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005634	nucleus	THOC6	IDA		Human	PMID:23621916
Cellular Component	GO:0000347	THO complex	THOC6	IDA		Human	PMID:15998806
Cellular Component	GO:0000445	THO complex part of transcription export complex	THOC6	IDA		Human	PMID:15998806
Cellular Component	GO:0000346	transcription export complex	THOC6	IDA		Human	PMID:15833825
Cellular Component	GO:0000346	transcription export complex	THOC6	IDA		Human	PMID:15998806
Biological Process	GO:0007417	central nervous system development	THOC6	IMP		Human	PMID:23621916
Biological Process	GO:0006406	mRNA export from nucleus	THOC6	IDA		Human	PMID:17190602
Biological Process	GO:0043066	negative regulation of apoptotic process	THOC6	IMP		Human	PMID:23621916
Biological Process	GO:0046784	viral mRNA export from host cell nucleus	THOC6	IDA		Human	PMID:18974867

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern