Comparative GO Graph (mouse, human, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes THSD4
  • Mouse genes Thsd4
  • Rat genes
  • Zfish genes adamtsl7
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Thsd4

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	Thsd4	IPI	PR:Q61554	Mouse	PMID:19940141
Cellular Component	GO:0062023	collagen-containing extracellular matrix	THSD4	HDA		Human	PMID:23979707
Cellular Component	GO:0062023	collagen-containing extracellular matrix	THSD4	HDA		Human	PMID:25037231
Cellular Component	GO:0070062	extracellular exosome	THSD4	HDA		Human	PMID:19199708
Cellular Component	GO:0031012	extracellular matrix	Thsd4	IDA		Mouse	PMID:19940141
Cellular Component	GO:0001527	microfibril	THSD4	IMP		Human	PMID:32855533
Cellular Component	GO:0001527	microfibril	Thsd4	IDA		Mouse	PMID:19940141
Biological Process	GO:0048251	elastic fiber assembly	Thsd4	IDA		Mouse	PMID:19940141
Biological Process	GO:0160054	microfibril assembly	THSD4	IMP		Human	PMID:32855533

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern