Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes TINAGL1
  • Mouse genes Tinagl1
  • Rat genes Tinagl1
  • Zfish genes tinagl1
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Tinagl1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0043236	laminin binding	Tinagl1	IPI	PR:P19137	Mouse	PMID:19587330
Molecular Function	GO:0005515	protein binding	TINAGL1	IPI	UniProtKB:P59991	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	TINAGL1	IPI	UniProtKB:Q15645	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	TINAGL1	IPI	UniProtKB:O75360	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TINAGL1	IPI	UniProtKB:O95429	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TINAGL1	IPI	UniProtKB:Q15645	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TINAGL1	IPI	UniProtKB:Q99697-2	Human	PMID:32296183
Cellular Component	GO:0062023	collagen-containing extracellular matrix	TINAGL1	HDA		Human	PMID:20551380
Cellular Component	GO:0062023	collagen-containing extracellular matrix	TINAGL1	HDA		Human	PMID:23979707
Cellular Component	GO:0062023	collagen-containing extracellular matrix	TINAGL1	HDA		Human	PMID:27068509
Cellular Component	GO:0062023	collagen-containing extracellular matrix	TINAGL1	HDA		Human	PMID:27559042
Cellular Component	GO:0062023	collagen-containing extracellular matrix	TINAGL1	HDA		Human	PMID:25037231
Cellular Component	GO:0062023	collagen-containing extracellular matrix	TINAGL1	HDA		Human	PMID:28675934
Cellular Component	GO:0062023	collagen-containing extracellular matrix	Tinagl1	HDA		Mouse	MGI:MGI:6201834|PMID:22159717
Cellular Component	GO:0062023	collagen-containing extracellular matrix	Tinagl1	HDA		Mouse	MGI:MGI:6201853|PMID:28071719
Cellular Component	GO:0005737	cytoplasm	Tinagl1	IDA		Mouse	PMID:19587330
Cellular Component	GO:0070062	extracellular exosome	TINAGL1	HDA		Human	PMID:19199708
Cellular Component	GO:0005615	extracellular space	Tinagl1	HDA		Mouse	MGI:MGI:5640941|PMID:24006456
Biological Process	GO:0048703	embryonic viscerocranium morphogenesis	tinagl1	IMP	ZFIN:ZDB-MRPHLNO-170822-1	Zfish	PMID:27243669
Biological Process	GO:0048703	embryonic viscerocranium morphogenesis	tinagl1	IMP	ZFIN:ZDB-MRPHLNO-170822-2	Zfish	PMID:27243669
Biological Process	GO:0048703	embryonic viscerocranium morphogenesis	tinagl1	IGI	ZFIN:ZDB-MRPHLNO-050509-2,ZFIN:ZDB-MRPHLNO-170822-1	Zfish	PMID:27243669
Biological Process	GO:0002040	sprouting angiogenesis	tinagl1	IMP	ZFIN:ZDB-MRPHLNO-101202-1	Zfish	PMID:21085487

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern