Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes TLCD3B
  • Mouse genes Tlcd3b
  • Rat genes Tlcd3b
  • Zfish genes tlcd3ba,tlcd3bb
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Tlcd3b

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0050291	sphingosine N-acyltransferase activity	Tlcd3b	IDA		Mouse	PMID:22154806
Cellular Component	GO:0005783	endoplasmic reticulum	TLCD3B	IDA		Human	GO_REF:0000054
Biological Process	GO:0007420	brain development	tlcd3ba	IMP	ZFIN:ZDB-MRPHLNO-121207-6	Zfish	PMID:22566537
Biological Process	GO:0021952	central nervous system projection neuron axonogenesis	tlcd3ba	IMP	ZFIN:ZDB-MRPHLNO-121207-6	Zfish	PMID:22566537
Biological Process	GO:0046513	ceramide biosynthetic process	Tlcd3b	IDA		Mouse	PMID:23275342
Biological Process	GO:0001654	eye development	tlcd3ba	IMP	ZFIN:ZDB-MRPHLNO-121207-6	Zfish	PMID:22566537
Biological Process	GO:0055088	lipid homeostasis	tlcd3ba	IMP	ZFIN:ZDB-GENO-180306-3	Zfish	PMID:28934389
Biological Process	GO:0035264	multicellular organism growth	tlcd3ba	IGI	ZFIN:ZDB-GENO-180306-1	Zfish	PMID:28934389
Biological Process	GO:0035264	multicellular organism growth	tlcd3ba	IMP	ZFIN:ZDB-GENO-180306-3	Zfish	PMID:28934389
Biological Process	GO:0045599	negative regulation of fat cell differentiation	Tlcd3b	IMP		Mouse	PMID:23275342

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern