Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes TLL1
  • Mouse genes Tll1
  • Rat genes Tll1
  • Zfish genes tll1
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Tll1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005518	collagen binding	Tll1	IDA		Mouse	PMID:12393877
Molecular Function	GO:0008237	metallopeptidase activity	tll1	IDA		Zfish	PMID:9395394
Molecular Function	GO:0008233	peptidase activity	tll1	IDA		Zfish	PMID:16518392
Molecular Function	GO:0005515	protein binding	tll1	IPI	ZFIN:ZDB-GENE-030530-1	Zfish	PMID:16518392
Biological Process	GO:0001568	blood vessel development	tll1	IMP	ZFIN:ZDB-GENO-050209-23	Zfish	PMID:10375503
Biological Process	GO:0048264	determination of ventral identity	tll1	IMP		Zfish	PMID:9007231
Biological Process	GO:0048264	determination of ventral identity	tll1	IMP	ZFIN:ZDB-GENO-050209-23	Zfish	PMID:10375503
Biological Process	GO:0048264	determination of ventral identity	tll1	IMP		Zfish	PMID:9395394
Biological Process	GO:0048264	determination of ventral identity	tll1	IGI	ZFIN:ZDB-GENE-020812-3	Zfish	PMID:15525664
Biological Process	GO:0009953	dorsal/ventral pattern formation	tll1	IMP	ZFIN:ZDB-GENO-050209-23	Zfish	PMID:11969259
Biological Process	GO:0009953	dorsal/ventral pattern formation	tll1	IGI	ZFIN:ZDB-MRPHLNO-041217-9,ZFIN:ZDB-MRPHLNO-060818-1	Zfish	PMID:16518392
Biological Process	GO:0009953	dorsal/ventral pattern formation	tll1	IGI	ZFIN:ZDB-MRPHLNO-041217-9,ZFIN:ZDB-MRPHLNO-050221-6,ZFIN:ZDB-MRPHLNO-060818-1	Zfish	PMID:20886103
Biological Process	GO:0009953	dorsal/ventral pattern formation	tll1	IGI	ZFIN:ZDB-MRPHLNO-060818-4,ZFIN:ZDB-MRPHLNO-060818-7	Zfish	PMID:16824737
Biological Process	GO:0009953	dorsal/ventral pattern formation	tll1	IMP	ZFIN:ZDB-GENO-001220-1	Zfish	PMID:16530746
Biological Process	GO:0009953	dorsal/ventral pattern formation	tll1	IGI	ZFIN:ZDB-MRPHLNO-041217-9,ZFIN:ZDB-MRPHLNO-060818-1	Zfish	PMID:20886103
Biological Process	GO:0009953	dorsal/ventral pattern formation	tll1	IGI	ZFIN:ZDB-MRPHLNO-041217-9,ZFIN:ZDB-MRPHLNO-060818-1,ZFIN:ZDB-MRPHLNO-060818-2	Zfish	PMID:16518392
Biological Process	GO:0035124	embryonic caudal fin morphogenesis	tll1	IMP	ZFIN:ZDB-GENO-050209-23	Zfish	PMID:10375503
Biological Process	GO:0035124	embryonic caudal fin morphogenesis	tll1	IMP		Zfish	PMID:9395394
Biological Process	GO:0035162	embryonic hemopoiesis	tll1	IMP		Zfish	PMID:9395394
Biological Process	GO:0001885	endothelial cell development	tll1	IMP	ZFIN:ZDB-GENO-050209-23	Zfish	PMID:10375503
Biological Process	GO:0001707	mesoderm formation	tll1	IMP	ZFIN:ZDB-GENO-050209-23	Zfish	PMID:10375503
Biological Process	GO:0030513	positive regulation of BMP signaling pathway	tll1	IMP	ZFIN:ZDB-GENO-050209-23	Zfish	PMID:10375503
Biological Process	GO:0030513	positive regulation of BMP signaling pathway	tll1	IMP		Zfish	PMID:9395394
Biological Process	GO:0036342	post-anal tail morphogenesis	tll1	IMP	ZFIN:ZDB-GENO-100601-3	Zfish	PMID:21610036
Biological Process	GO:0036342	post-anal tail morphogenesis	tll1	IGI	ZFIN:ZDB-MRPHLNO-060724-1,ZFIN:ZDB-MRPHLNO-060724-2,ZFIN:ZDB-MRPHLNO-060818-7	Zfish	PMID:21610036
Biological Process	GO:0036342	post-anal tail morphogenesis	tll1	IGI	ZFIN:ZDB-GENO-100601-3,ZFIN:ZDB-MRPHLNO-060724-1,ZFIN:ZDB-MRPHLNO-060724-2	Zfish	PMID:21610036
Biological Process	GO:0036342	post-anal tail morphogenesis	tll1	IGI	ZFIN:ZDB-MRPHLNO-060815-1,ZFIN:ZDB-MRPHLNO-060818-7	Zfish	PMID:21610036
Biological Process	GO:0036342	post-anal tail morphogenesis	tll1	IGI	ZFIN:ZDB-GENO-100601-3,ZFIN:ZDB-GENO-120430-1	Zfish	PMID:21610036
Biological Process	GO:0006508	proteolysis	tll1	IDA		Zfish	PMID:16518392
Biological Process	GO:0006508	proteolysis	tll1	IDA		Zfish	PMID:9395394

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern