Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes TMEM165
  • Mouse genes Tmem165
  • Rat genes Tmem165
  • Zfish genes tmem165
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Tmem165

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Cellular Component	GO:0010008	endosome membrane	TMEM165	IDA		Human	PMID:23575229
Cellular Component	GO:0005794	Golgi apparatus	TMEM165	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005794	Golgi apparatus	TMEM165	IDA		Human	PMID:22683087
Cellular Component	GO:0043231	intracellular membrane-bounded organelle	TMEM165	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005765	lysosomal membrane	TMEM165	IDA		Human	PMID:23575229
Cellular Component	GO:0032588	trans-Golgi network membrane	TMEM165	IDA		Human	PMID:23575229
Biological Process	GO:0051216	cartilage development	tmem165	IMP	ZFIN:ZDB-MRPHLNO-151002-2	Zfish	PMID:25609749
Biological Process	GO:0060536	cartilage morphogenesis	tmem165	IMP	ZFIN:ZDB-MRPHLNO-151002-2	Zfish	PMID:25609749
Biological Process	GO:0002062	chondrocyte differentiation	tmem165	IMP	ZFIN:ZDB-MRPHLNO-151002-2	Zfish	PMID:25609749
Biological Process	GO:0048703	embryonic viscerocranium morphogenesis	tmem165	IMP	ZFIN:ZDB-MRPHLNO-151002-2	Zfish	PMID:25609749
Biological Process	GO:0032472	Golgi calcium ion transport	TMEM165	IDA		Human	PMID:23569283
Biological Process	GO:0006874	intracellular calcium ion homeostasis	TMEM165	IGI		Human	PMID:23569283
Biological Process	GO:0001649	osteoblast differentiation	tmem165	IMP	ZFIN:ZDB-MRPHLNO-151002-2	Zfish	PMID:25609749
Biological Process	GO:0006487	protein N-linked glycosylation	TMEM165	IMP		Human	PMID:22683087
Biological Process	GO:0006487	protein N-linked glycosylation	tmem165	IMP	ZFIN:ZDB-MRPHLNO-151002-2	Zfish	PMID:25609749
Biological Process	GO:0035751	regulation of lysosomal lumen pH	TMEM165	IMP		Human	PMID:23569283

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern