Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes TMEM9
  • Mouse genes Tmem9
  • Rat genes Tmem9
  • Zfish genes tmem9
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Tmem9

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	TMEM9	IPI	UniProtKB:O75787	Human	PMID:30374053
Molecular Function	GO:0005515	protein binding	TMEM9	IPI	UniProtKB:P61421	Human	PMID:30374053
Molecular Function	GO:0005515	protein binding	TMEM9	IPI	UniProtKB:A5PKU2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TMEM9	IPI	UniProtKB:O14523	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TMEM9	IPI	UniProtKB:O43752	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TMEM9	IPI	UniProtKB:O95832	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TMEM9	IPI	UniProtKB:P27449	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TMEM9	IPI	UniProtKB:P30536	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TMEM9	IPI	UniProtKB:P54849	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TMEM9	IPI	UniProtKB:P78369	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TMEM9	IPI	UniProtKB:Q8IWU4	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TMEM9	IPI	UniProtKB:Q9H2L4	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TMEM9	IPI	UniProtKB:Q9NV12	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TMEM9	IPI	UniProtKB:Q9NZG7	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TMEM9	IPI	UniProtKB:Q9UHJ9-5	Human	PMID:32296183
Cellular Component	GO:0045171	intercellular bridge	TMEM9	IDA		Human	GO_REF:0000052
Cellular Component	GO:0043231	intracellular membrane-bounded organelle	TMEM9	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005770	late endosome	TMEM9	IDA		Human	PMID:12359240
Cellular Component	GO:0005765	lysosomal membrane	TMEM9	IDA		Human	PMID:30374053
Cellular Component	GO:0005764	lysosome	TMEM9	IDA		Human	PMID:12359240
Cellular Component	GO:0015630	microtubule cytoskeleton	TMEM9	IDA		Human	GO_REF:0000052
Cellular Component	GO:0072686	mitotic spindle	TMEM9	IDA		Human	GO_REF:0000052
Cellular Component	GO:0032585	multivesicular body membrane	TMEM9	IDA		Human	PMID:30374053
Biological Process	GO:0048388	endosomal lumen acidification	TMEM9	IDA		Human	PMID:30374053
Biological Process	GO:0007042	lysosomal lumen acidification	TMEM9	IDA		Human	PMID:30374053
Biological Process	GO:0090263	positive regulation of canonical Wnt signaling pathway	TMEM9	IDA		Human	PMID:30374053
Biological Process	GO:0090263	positive regulation of canonical Wnt signaling pathway	Tmem9	IMP		Mouse	MGI:MGI:6271361|PMID:30374053
Biological Process	GO:0070070	proton-transporting V-type ATPase complex assembly	TMEM9	IDA		Human	PMID:30374053
Biological Process	GO:0042176	regulation of protein catabolic process	Tmem9	IMP	UniProtKB:Q61315	Mouse	MGI:MGI:6450309|PMID:32380568

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern