Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes TMLHE
  • Mouse genes Tmlhe
  • Rat genes Tmlhe
  • Zfish genes tmlhe
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Tmlhe

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0016702	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen	Tmlhe	IDA		Mouse	PMID:12121276
Molecular Function	GO:0050353	trimethyllysine dioxygenase activity	TMLHE	IMP		Human	PMID:23092983
Molecular Function	GO:0050353	trimethyllysine dioxygenase activity	Tmlhe	IDA		Rat	PMID:11431483|RGD:70558
Cellular Component	GO:0005739	mitochondrion	TMLHE	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005739	mitochondrion	Tmlhe	IDA		Mouse	PMID:12121276
Cellular Component	GO:0005739	mitochondrion	Tmlhe	IDA		Rat	PMID:11431483|RGD:70558
Biological Process	GO:0045329	carnitine biosynthetic process	TMLHE	IMP		Human	PMID:23092983
Biological Process	GO:0045329	carnitine biosynthetic process	Tmlhe	IDA		Mouse	PMID:12121276

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern