Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes TMPO
  • Mouse genes Tmpo
  • Rat genes Tmpo
  • Zfish genes tmpoa,tmpob
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Tmpo

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0045296	cadherin binding	TMPO	HDA		Human	PMID:25468996
Molecular Function	GO:0003682	chromatin binding	tmpoa	IDA		Zfish	PMID:12734396
Molecular Function	GO:0042802	identical protein binding	Tmpo	IPI	UniProtKB:Q61033-1	Mouse	MGI:MGI:5927258|PMID:17562312
Molecular Function	GO:0005515	protein binding	TMPO	IPI	UniProtKB:P02545	Human	PMID:16247757
Molecular Function	GO:0005515	protein binding	TMPO	IPI	UniProtKB:P02545	Human	PMID:29568061
Molecular Function	GO:0005515	protein binding	TMPO	IPI	UniProtKB:Q8TDX7	Human	PMID:32707033
Molecular Function	GO:0005515	protein binding	Tmpo	IPI	UniProtKB:Q64321	Mouse	MGI:MGI:5437585|PMID:22726435
Molecular Function	GO:0005515	protein binding	Tmpo	IPI	PR:Q920G9	Mouse	PMID:11591818
Molecular Function	GO:0005515	protein binding	Tmpo	IPI	RGD:620662	Rat	PMID:15546916|RGD:10054038
Cellular Component	GO:0000785	chromatin	TMPO	IDA		Human	PMID:17284516
Cellular Component	GO:0000793	condensed chromosome	tmpoa	IDA		Zfish	PMID:12734396
Cellular Component	GO:0016020	membrane	tmpoa	IDA		Zfish	PMID:12734396
Cellular Component	GO:0005635	nuclear envelope	Tmpo	IDA		Mouse	PMID:18809722
Cellular Component	GO:0005635	nuclear envelope	Tmpo	IDA		Mouse	PMID:11591818
Cellular Component	GO:0005637	nuclear inner membrane	Tmpo	IDA		Rat	PMID:7737115|RGD:634476
Cellular Component	GO:0042175	nuclear outer membrane-endoplasmic reticulum membrane network	tmpoa	IDA		Zfish	PMID:12734396
Cellular Component	GO:0005634	nucleus	TMPO	IDA		Human	PMID:17284516
Biological Process	GO:0007084	mitotic nuclear membrane reassembly	tmpoa	IDA		Zfish	PMID:12734396
Biological Process	GO:0006355	regulation of DNA-templated transcription	Tmpo	IDA		Mouse	PMID:11591818

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern