Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes TNMD
  • Mouse genes Tnmd
  • Rat genes Tnmd
  • Zfish genes tnmd
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Tnmd

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	TNMD	IPI	UniProtKB:Q9BSE2	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	TNMD	IPI	UniProtKB:Q9BSE2	Human	PMID:31515488
Biological Process	GO:0071773	cellular response to BMP stimulus	Tnmd	IEP		Rat	PMID:21412429|RGD:8553701
Biological Process	GO:0001886	endothelial cell morphogenesis	Tnmd	IDA		Mouse	PMID:12714610
Biological Process	GO:0016525	negative regulation of angiogenesis	Tnmd	IDA		Mouse	PMID:12714610
Biological Process	GO:0001937	negative regulation of endothelial cell proliferation	Tnmd	IDA		Mouse	PMID:12714610
Biological Process	GO:0035990	tendon cell differentiation	Tnmd	IEP		Rat	PMID:21412429|RGD:8553701

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern