Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes TNN
  • Mouse genes Tnn
  • Rat genes Tnn
  • Zfish genes tnn
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Tnn

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0042802	identical protein binding	Tnn	IDA		Mouse	PMID:14709716
Molecular Function	GO:0005178	integrin binding	Tnn	IDA		Mouse	PMID:14709716
Cellular Component	GO:0097442	CA3 pyramidal cell dendrite	Tnn	IDA		Mouse	MGI:MGI:2664472|PMID:12812753
Cellular Component	GO:0009986	cell surface	Tnn	IDA		Mouse	PMID:12812753
Cellular Component	GO:0062023	collagen-containing extracellular matrix	TNN	IDA		Human	PMID:19884327
Cellular Component	GO:0062023	collagen-containing extracellular matrix	Tnn	IDA		Mouse	MGI:MGI:3028459|PMID:14709716
Cellular Component	GO:0031012	extracellular matrix	Tnn	IDA		Mouse	PMID:14709716
Cellular Component	GO:1990026	hippocampal mossy fiber expansion	Tnn	IDA		Mouse	MGI:MGI:2664472|PMID:12812753
Cellular Component	GO:0043005	neuron projection	Tnn	IDA		Mouse	MGI:MGI:2664472|PMID:12812753
Cellular Component	GO:0043025	neuronal cell body	Tnn	IDA		Mouse	MGI:MGI:2664472|PMID:12812753
Cellular Component	GO:0090733	tenascin complex	TNN	IPI		Human	PMID:17909022
Cellular Component	GO:0090733	tenascin complex	Tnn	IPI		Mouse	MGI:MGI:3028459|PMID:14709716
Biological Process	GO:0007409	axonogenesis	Tnn	IDA		Mouse	PMID:12812753
Biological Process	GO:0007160	cell-matrix adhesion	Tnn	IDA		Mouse	PMID:14531729
Biological Process	GO:0070593	dendrite self-avoidance	Tnn	IDA		Mouse	MGI:MGI:2664472|PMID:12812753
Biological Process	GO:1905240	negative regulation of canonical Wnt signaling pathway involved in osteoblast differentiation	Tnn	IDA		Mouse	MGI:MGI:3710297|PMID:17395156
Biological Process	GO:2001223	negative regulation of neuron migration	Tnn	IDA		Mouse	MGI:MGI:2664472|PMID:12812753
Biological Process	GO:0045668	negative regulation of osteoblast differentiation	Tnn	IDA		Mouse	MGI:MGI:3710297|PMID:17395156
Biological Process	GO:0033689	negative regulation of osteoblast proliferation	Tnn	IDA		Mouse	MGI:MGI:3710297|PMID:17395156
Biological Process	GO:0001764	neuron migration	Tnn	IDA		Mouse	MGI:MGI:2664472|PMID:12812753
Biological Process	GO:1990138	neuron projection extension	Tnn	IDA		Mouse	MGI:MGI:2664472|PMID:12812753
Biological Process	GO:0002076	osteoblast development	Tnn	IDA		Mouse	MGI:MGI:3710297|PMID:17395156
Biological Process	GO:0010976	positive regulation of neuron projection development	Tnn	IDA		Mouse	MGI:MGI:2664472|PMID:12812753
Biological Process	GO:1903672	positive regulation of sprouting angiogenesis	TNN	IDA		Human	PMID:19884327
Biological Process	GO:1903010	regulation of bone development	Tnn	IDA		Mouse	MGI:MGI:3710297|PMID:17395156
Biological Process	GO:0030155	regulation of cell adhesion	TNN	IDA		Human	PMID:17909022
Biological Process	GO:0030155	regulation of cell adhesion	Tnn	IDA		Mouse	MGI:MGI:3028459|PMID:14709716
Biological Process	GO:0030334	regulation of cell migration	TNN	IDA		Human	PMID:17909022
Biological Process	GO:0030334	regulation of cell migration	Tnn	IDA		Mouse	MGI:MGI:3028459|PMID:14709716
Biological Process	GO:1905899	regulation of smooth muscle tissue development	Tnn	IDA		Mouse	MGI:MGI:3028459|PMID:14709716

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern