Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes TNPO1
  • Mouse genes Tnpo1
  • Rat genes Tnpo1
  • Zfish genes tnpo1
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Tnpo1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	TNPO1	IPI	UniProtKB:P09651-2	Human	PMID:17435768
Molecular Function	GO:0005515	protein binding	TNPO1	IPI	UniProtKB:P52272	Human	PMID:17435768
Molecular Function	GO:0005515	protein binding	TNPO1	IPI	UniProtKB:P62993	Human	PMID:17474147
Molecular Function	GO:0005515	protein binding	TNPO1	IPI	UniProtKB:P55265-5	Human	PMID:19124606
Molecular Function	GO:0005515	protein binding	Tnpo1	IPI	PR:E9Q9D5	Mouse	PMID:23055941
Molecular Function	GO:0003723	RNA binding	TNPO1	HDA		Human	PMID:22658674
Molecular Function	GO:0003723	RNA binding	TNPO1	HDA		Human	PMID:22681889
Cellular Component	GO:0070062	extracellular exosome	TNPO1	HDA		Human	PMID:18570454
Biological Process	GO:0006606	protein import into nucleus	TNPO1	IDA		Human	PMID:9144189
Biological Process	GO:0007224	smoothened signaling pathway	tnpo1	IMP	ZFIN:ZDB-MRPHLNO-180212-2,ZFIN:ZDB-MRPHLNO-180212-3	Zfish	PMID:28777795
Biological Process	GO:0061053	somite development	tnpo1	IMP	ZFIN:ZDB-MRPHLNO-180212-2,ZFIN:ZDB-MRPHLNO-180212-3	Zfish	PMID:28777795

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern