Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes TNRC6A
  • Mouse genes Tnrc6a
  • Rat genes Tnrc6a
  • Zfish genes tnrc6a
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Tnrc6a

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	TNRC6A	IPI	UniProtKB:Q9HCK5	Human	PMID:19167051
Molecular Function	GO:0005515	protein binding	TNRC6A	IPI	UniProtKB:Q9H9G7	Human	PMID:19324964
Molecular Function	GO:0005515	protein binding	TNRC6A	IPI	UniProtKB:Q9HCK5	Human	PMID:19324964
Molecular Function	GO:0005515	protein binding	TNRC6A	IPI	UniProtKB:Q9UKV8	Human	PMID:19324964
Molecular Function	GO:0005515	protein binding	TNRC6A	IPI	UniProtKB:Q9UL18	Human	PMID:19324964
Molecular Function	GO:0005515	protein binding	TNRC6A	IPI	UniProtKB:Q9H9G7	Human	PMID:19383768
Molecular Function	GO:0005515	protein binding	TNRC6A	IPI	UniProtKB:Q9HCK5	Human	PMID:19383768
Molecular Function	GO:0005515	protein binding	TNRC6A	IPI	UniProtKB:Q9UKV8	Human	PMID:19383768
Molecular Function	GO:0005515	protein binding	TNRC6A	IPI	UniProtKB:Q9UL18	Human	PMID:19383768
Molecular Function	GO:0005515	protein binding	TNRC6A	IPI	UniProtKB:Q9UKV8	Human	PMID:19716330
Molecular Function	GO:0005515	protein binding	TNRC6A	IPI	UniProtKB:Q9UL18	Human	PMID:19716330
Molecular Function	GO:0005515	protein binding	TNRC6A	IPI	UniProtKB:P11940	Human	PMID:21063388
Molecular Function	GO:0005515	protein binding	TNRC6A	IPI	UniProtKB:Q9UKV8	Human	PMID:21840310
Molecular Function	GO:0005515	protein binding	TNRC6A	IPI	UniProtKB:A5YKK6	Human	PMID:21981923
Molecular Function	GO:0005515	protein binding	TNRC6A	IPI	UniProtKB:Q58A45	Human	PMID:21981923
Molecular Function	GO:0005515	protein binding	TNRC6A	IPI	UniProtKB:Q9UKV8	Human	PMID:22484317
Molecular Function	GO:0005515	protein binding	TNRC6A	IPI	UniProtKB:Q9UL18	Human	PMID:22484317
Molecular Function	GO:0005515	protein binding	TNRC6A	IPI	UniProtKB:Q9UKV8	Human	PMID:23090477
Molecular Function	GO:0005515	protein binding	TNRC6A	IPI	UniProtKB:A5YKK6	Human	PMID:24768540
Molecular Function	GO:0005515	protein binding	TNRC6A	IPI	UniProtKB:Q92600	Human	PMID:24768540
Molecular Function	GO:0005515	protein binding	TNRC6A	IPI	UniProtKB:Q15645	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	TNRC6A	IPI	UniProtKB:Q5D1E8	Human	PMID:26134560
Molecular Function	GO:0005515	protein binding	TNRC6A	IPI	UniProtKB:Q7KZF4,UniProtKB:Q9UKV8,UniProtKB:Q9UPY3	Human	PMID:28546213
Molecular Function	GO:0005515	protein binding	TNRC6A	IPI	UniProtKB:Q9H9G7	Human	PMID:28683311
Molecular Function	GO:0005515	protein binding	TNRC6A	IPI	UniProtKB:Q9UKV8	Human	PMID:28683311
Molecular Function	GO:0005515	protein binding	TNRC6A	IPI	UniProtKB:P11940	Human	PMID:28877994
Molecular Function	GO:0005515	protein binding	TNRC6A	IPI	UniProtKB:Q9UKV8	Human	PMID:28877994
Molecular Function	GO:0005515	protein binding	TNRC6A	IPI	UniProtKB:O15063	Human	PMID:29395067
Molecular Function	GO:0003723	RNA binding	TNRC6A	HDA		Human	PMID:22681889
Cellular Component	GO:0005794	Golgi apparatus	TNRC6A	IDA		Human	GO_REF:0000052
Cellular Component	GO:0043231	intracellular membrane-bounded organelle	TNRC6A	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005654	nucleoplasm	TNRC6A	IDA		Human	GO_REF:0000052
Cellular Component	GO:0000932	P-body	TNRC6A	IDA		Human	PMID:20616046
Cellular Component	GO:0016442	RISC complex	TNRC6A	IDA		Human	PMID:17671087
Biological Process	GO:0009267	cellular response to starvation	Tnrc6a	IDA		Mouse	PMID:15494374
Biological Process	GO:0007492	endoderm development	Tnrc6a	IMP	MGI:MGI:4052360	Mouse	PMID:28811219
Biological Process	GO:0035195	miRNA-mediated gene silencing	TNRC6A	IMP		Human	PMID:23172285
Biological Process	GO:0035278	miRNA-mediated gene silencing by inhibition of translation	TNRC6A	IDA		Human	PMID:17671087
Biological Process	GO:0017148	negative regulation of translation	tnrc6a	IDA		Zfish	PMID:22232654
Biological Process	GO:0000289	nuclear-transcribed mRNA poly(A) tail shortening	tnrc6a	IDA		Zfish	PMID:22232654

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern