Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes TPSAB1,TPSB2
  • Mouse genes Tpsb2
  • Rat genes Tpsb2
  • Zfish genes si:dkey-16l2.17,zgc:92313
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Tpsb2

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0008201	heparin binding	Tpsb2	IDA		Mouse	PMID:11533057
Molecular Function	GO:0042802	identical protein binding	TPSAB1	IPI	UniProtKB:Q15661	Human	PMID:29661938
Molecular Function	GO:0008233	peptidase activity	Tpsb2	IDA		Mouse	PMID:11533057
Molecular Function	GO:0008233	peptidase activity	Tpsb2	IDA		Mouse	PMID:23624557
Molecular Function	GO:0005515	protein binding	TPSB2	IPI	UniProtKB:P35237	Human	PMID:14670919
Molecular Function	GO:0005515	protein binding	TPSAB1	IPI	UniProtKB:P16333	Human	PMID:17474147
Molecular Function	GO:0005515	protein binding	TPSAB1	IPI	UniProtKB:P27986	Human	PMID:17474147
Molecular Function	GO:0005515	protein binding	Tpsb2	IPI	PR:P21845	Mouse	PMID:11533057
Cellular Component	GO:0062023	collagen-containing extracellular matrix	TPSB2	HDA		Human	PMID:27559042
Cellular Component	GO:0062023	collagen-containing extracellular matrix	TPSAB1	HDA		Human	PMID:20551380
Cellular Component	GO:0005576	extracellular region	TPSAB1	HDA		Human	PMID:27068509
Cellular Component	GO:0005615	extracellular space	TPSAB1	HDA		Human	PMID:20551380
Biological Process	GO:0022617	extracellular matrix disassembly	TPSAB1	IDA		Human	PMID:27068509

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern