Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes TRA2B
  • Mouse genes Tra2b
  • Rat genes Tra2b
  • Zfish genes tra2b
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Tra2b

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0042802	identical protein binding	TRA2B	IDA		Human	PMID:10749975
Molecular Function	GO:0042802	identical protein binding	TRA2B	IPI	UniProtKB:P62995	Human	PMID:32296183
Molecular Function	GO:0003729	mRNA binding	TRA2B	IDA		Human	PMID:12165565
Molecular Function	GO:0003729	mRNA binding	TRA2B	IDA		Human	PMID:12761049
Molecular Function	GO:0036002	pre-mRNA binding	TRA2B	IDA		Human	PMID:25689357
Molecular Function	GO:0005515	protein binding	TRA2B	IPI	UniProtKB:P09651	Human	PMID:10749975
Molecular Function	GO:0005515	protein binding	TRA2B	IPI	UniProtKB:P38159	Human	PMID:10749975
Molecular Function	GO:0005515	protein binding	TRA2B	IPI	UniProtKB:Q13242	Human	PMID:10749975
Molecular Function	GO:0005515	protein binding	TRA2B	IPI	UniProtKB:Q16629	Human	PMID:10749975
Molecular Function	GO:0005515	protein binding	TRA2B	IPI	UniProtKB:P0DJD3	Human	PMID:12165565
Molecular Function	GO:0005515	protein binding	TRA2B	IPI	UniProtKB:P38159	Human	PMID:12165565
Molecular Function	GO:0005515	protein binding	TRA2B	IPI	UniProtKB:Q16630	Human	PMID:15169763
Molecular Function	GO:0005515	protein binding	TRA2B	IPI	UniProtKB:Q9BQA5	Human	PMID:17577209
Molecular Function	GO:0005515	protein binding	TRA2B	IPI	UniProtKB:P84586	Human	PMID:19282290
Molecular Function	GO:0005515	protein binding	TRA2B	IPI	UniProtKB:Q96MU7	Human	PMID:21988832
Molecular Function	GO:0005515	protein binding	TRA2B	IPI	UniProtKB:P38159	Human	PMID:22365833
Molecular Function	GO:0005515	protein binding	TRA2B	IPI	UniProtKB:Q08170	Human	PMID:22365833
Molecular Function	GO:0005515	protein binding	TRA2B	IPI	UniProtKB:P49761	Human	PMID:23602568
Molecular Function	GO:0005515	protein binding	TRA2B	IPI	UniProtKB:P78362	Human	PMID:23602568
Molecular Function	GO:0005515	protein binding	TRA2B	IPI	UniProtKB:P38159	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TRA2B	IPI	UniProtKB:P49759-3	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TRA2B	IPI	UniProtKB:P49761	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TRA2B	IPI	UniProtKB:P78362	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TRA2B	IPI	UniProtKB:Q01081	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TRA2B	IPI	UniProtKB:Q07955	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TRA2B	IPI	UniProtKB:Q08170	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TRA2B	IPI	UniProtKB:Q13242	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TRA2B	IPI	UniProtKB:Q15415	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TRA2B	IPI	UniProtKB:Q7L775	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TRA2B	IPI	UniProtKB:Q86VE0	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TRA2B	IPI	UniProtKB:Q96A72	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TRA2B	IPI	UniProtKB:Q96MU7	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TRA2B	IPI	UniProtKB:Q9BRL6-2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TRA2B	IPI	UniProtKB:Q9Y5E9	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TRA2B	IPI	UniProtKB:P49761	Human	PMID:32707033
Molecular Function	GO:0005515	protein binding	TRA2B	IPI	UniProtKB:P78362	Human	PMID:32707033
Molecular Function	GO:0005515	protein binding	Tra2b	IPI	UniProtKB:B5TVM2|UniProtKB:Q8CBR1	Mouse	MGI:MGI:6810798|PMID:28785060
Molecular Function	GO:0005515	protein binding	Tra2b	IPI	UniProtKB:O41974	Mouse	MGI:MGI:5787727|PMID:26581985
Molecular Function	GO:0005515	protein binding	Tra2b	IPI	RGD:1565256	Rat	PMID:19282290|RGD:2316827
Molecular Function	GO:0019904	protein domain specific binding	TRA2B	IPI	UniProtKB:P0DJD4	Human	PMID:10749975
Molecular Function	GO:0003723	RNA binding	TRA2B	IMP		Human	PMID:10749975
Molecular Function	GO:0003723	RNA binding	TRA2B	HDA		Human	PMID:22658674
Molecular Function	GO:0003723	RNA binding	TRA2B	HDA		Human	PMID:22681889
Cellular Component	GO:0005637	nuclear inner membrane	Tra2b	IDA		Mouse	PMID:23932931
Cellular Component	GO:0005654	nucleoplasm	TRA2B	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005634	nucleus	TRA2B	IDA		Human	PMID:10749975
Cellular Component	GO:0005634	nucleus	TRA2B	HDA		Human	PMID:16791210
Cellular Component	GO:0005634	nucleus	TRA2B	HDA		Human	PMID:21630459
Cellular Component	GO:0005634	nucleus	TRA2B	IDA		Human	PMID:9546399
Cellular Component	GO:0005634	nucleus	Tra2b	IDA		Mouse	MGI:MGI:6810798|PMID:28785060
Cellular Component	GO:0005634	nucleus	Tra2b	IDA		Mouse	PMID:23932931
Cellular Component	GO:0005634	nucleus	Tra2b	IDA		Rat	PMID:24098751|RGD:11038792
Cellular Component	GO:0048471	perinuclear region of cytoplasm	Tra2b	IDA		Rat	PMID:24098751|RGD:11038792
Cellular Component	GO:0032991	protein-containing complex	TRA2B	IDA		Human	PMID:10749975
Cellular Component	GO:0005681	spliceosomal complex	TRA2B	IMP		Human	PMID:25689357
Biological Process	GO:0071333	cellular response to glucose stimulus	TRA2B	IMP		Human	PMID:25689357
Biological Process	GO:0021796	cerebral cortex regionalization	Tra2b	IMP	MGI:MGI:2176173,MGI:MGI:4450919	Mouse	PMID:24586484
Biological Process	GO:1990403	embryonic brain development	Tra2b	IMP	MGI:MGI:2176173,MGI:MGI:4450919	Mouse	PMID:22194695
Biological Process	GO:0000398	mRNA splicing, via spliceosome	TRA2B	IDA		Human	PMID:9546399
Biological Process	GO:0000398	mRNA splicing, via spliceosome	Tra2b	IMP	MGI:MGI:2176173,MGI:MGI:4450919	Mouse	PMID:22194695
Biological Process	GO:0048026	positive regulation of mRNA splicing, via spliceosome	TRA2B	IDA		Human	PMID:15009664
Biological Process	GO:0048026	positive regulation of mRNA splicing, via spliceosome	Tra2b	IMP	MGI:MGI:2176173,MGI:MGI:4450919	Mouse	PMID:22194695
Biological Process	GO:0000381	regulation of alternative mRNA splicing, via spliceosome	TRA2B	IDA		Human	PMID:12165565
Biological Process	GO:0000381	regulation of alternative mRNA splicing, via spliceosome	TRA2B	IDA		Human	PMID:12761049
Biological Process	GO:0000381	regulation of alternative mRNA splicing, via spliceosome	TRA2B	IMP		Human	PMID:25689357
Biological Process	GO:0043484	regulation of RNA splicing	TRA2B	IMP		Human	PMID:10749975
Biological Process	GO:0043484	regulation of RNA splicing	Tra2b	IMP		Mouse	MGI:MGI:6810798|PMID:28785060
Biological Process	GO:0000302	response to reactive oxygen species	Tra2b	IEP		Rat	PMID:7499316|RGD:729705

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern