Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes TRABD2B
  • Mouse genes Trabd2b
  • Rat genes Trabd2b
  • Zfish genes trabd2a,trabd2b
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Trabd2b

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0004222	metalloendopeptidase activity	TRABD2B	IDA		Human	PMID:22726442
Molecular Function	GO:0005515	protein binding	TRABD2B	IPI	UniProtKB:P27467	Human	PMID:22726442
Molecular Function	GO:0017147	Wnt-protein binding	TRABD2B	IDA		Human	PMID:22726442
Molecular Function	GO:0017147	Wnt-protein binding	TRABD2B	IPI	UniProtKB:P28026	Human	PMID:22726442
Cellular Component	GO:0031090	organelle membrane	TRABD2B	IDA		Human	PMID:22726442
Cellular Component	GO:0005886	plasma membrane	TRABD2B	IDA		Human	PMID:22726442
Biological Process	GO:0030178	negative regulation of Wnt signaling pathway	TRABD2B	IDA		Human	PMID:22726442
Biological Process	GO:1904808	positive regulation of protein oxidation	TRABD2B	IDA		Human	PMID:22726442
Biological Process	GO:0031334	positive regulation of protein-containing complex assembly	TRABD2B	IDA		Human	PMID:22726442
Biological Process	GO:0006508	proteolysis	TRABD2B	IDA		Human	PMID:22726442

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern