Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes TRAPPC10
  • Mouse genes Trappc10
  • Rat genes Trappc10
  • Zfish genes trappc10
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Trappc10

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	TRAPPC10	IPI	UniProtKB:Q96QF0	Human	PMID:21273506
Molecular Function	GO:0005515	protein binding	TRAPPC10	IPI	UniProtKB:O43617,UniProtKB:P0DI81,UniProtKB:Q7Z392,UniProtKB:Q8WVT3,UniProtKB:Q9UL33,UniProtKB:Q9Y2L5	Human	PMID:21525244
Molecular Function	GO:0005515	protein binding	TRAPPC10	IPI	UniProtKB:P0DI81,UniProtKB:Q7Z392,UniProtKB:Q8WVT3,UniProtKB:Q96Q05,UniProtKB:Q9Y2L5	Human	PMID:21525244
Molecular Function	GO:0005515	protein binding	TRAPPC10	IPI	UniProtKB:Q5T215	Human	PMID:21525244
Molecular Function	GO:0005515	protein binding	TRAPPC10	IPI	UniProtKB:Q7Z392,UniProtKB:Q8WVT3	Human	PMID:21525244
Molecular Function	GO:0005515	protein binding	TRAPPC10	IPI	UniProtKB:Q7Z392,UniProtKB:Q8WVT3,UniProtKB:Q96Q05,UniProtKB:Q9UL33,UniProtKB:Q9Y2L5	Human	PMID:21525244
Molecular Function	GO:0005515	protein binding	TRAPPC10	IPI	UniProtKB:Q96QF0	Human	PMID:27173435
Molecular Function	GO:0005515	protein binding	TRAPPC10	IPI	UniProtKB:Q8WVR3	Human	PMID:31467083
Cellular Component	GO:0030008	TRAPP complex	TRAPPC10	IDA		Human	PMID:21525244
Biological Process	GO:0006891	intra-Golgi vesicle-mediated transport	TRAPPC10	IMP		Human	PMID:35298461

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern