Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes TRAPPC12
  • Mouse genes Trappc12
  • Rat genes Trappc12
  • Zfish genes trappc12
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Trappc12

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	TRAPPC12	IPI	UniProtKB:O43617,UniProtKB:P0DI81,UniProtKB:P48553,UniProtKB:Q7Z392,UniProtKB:Q9UL33,UniProtKB:Q9Y2L5	Human	PMID:21525244
Molecular Function	GO:0005515	protein binding	TRAPPC12	IPI	UniProtKB:O43617,UniProtKB:P0DI81,UniProtKB:Q7Z392,UniProtKB:Q9UL33	Human	PMID:21525244
Molecular Function	GO:0005515	protein binding	TRAPPC12	IPI	UniProtKB:P0DI81,UniProtKB:P48553,UniProtKB:Q7Z392,UniProtKB:Q96Q05,UniProtKB:Q9Y2L5	Human	PMID:21525244
Molecular Function	GO:0005515	protein binding	TRAPPC12	IPI	UniProtKB:P48553,UniProtKB:Q7Z392	Human	PMID:21525244
Molecular Function	GO:0005515	protein binding	TRAPPC12	IPI	UniProtKB:P48553,UniProtKB:Q7Z392,UniProtKB:Q96Q05,UniProtKB:Q9UL33,UniProtKB:Q9Y2L5	Human	PMID:21525244
Molecular Function	GO:0005515	protein binding	TRAPPC12	IPI	UniProtKB:Q5T215	Human	PMID:21525244
Molecular Function	GO:0005515	protein binding	TRAPPC12	IPI	UniProtKB:Q02224	Human	PMID:25918224
Molecular Function	GO:0005515	protein binding	TRAPPC12	IPI	UniProtKB:I6L957	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TRAPPC12	IPI	UniProtKB:O00327-8	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TRAPPC12	IPI	UniProtKB:Q96LW2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TRAPPC12	IPI	UniProtKB:Q9HAP6	Human	PMID:32296183
Cellular Component	GO:0005793	endoplasmic reticulum-Golgi intermediate compartment	TRAPPC12	IMP		Human	PMID:21525244
Cellular Component	GO:0005794	Golgi apparatus	TRAPPC12	IDA		Human	GO_REF:0000052
Cellular Component	GO:0000776	kinetochore	TRAPPC12	IDA		Human	PMID:25918224
Cellular Component	GO:0005654	nucleoplasm	TRAPPC12	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005634	nucleus	TRAPPC12	IDA		Human	PMID:25918224
Cellular Component	GO:0048471	perinuclear region of cytoplasm	TRAPPC12	IMP		Human	PMID:21525244
Cellular Component	GO:0030008	TRAPP complex	TRAPPC12	IDA		Human	PMID:21525244
Biological Process	GO:0006888	endoplasmic reticulum to Golgi vesicle-mediated transport	TRAPPC12	IMP		Human	PMID:21525244
Biological Process	GO:0007030	Golgi organization	TRAPPC12	IMP		Human	PMID:21525244
Biological Process	GO:0051310	metaphase plate congression	TRAPPC12	IMP		Human	PMID:25918224
Biological Process	GO:1905342	positive regulation of protein localization to kinetochore	TRAPPC12	IMP		Human	PMID:25918224
Biological Process	GO:0090234	regulation of kinetochore assembly	TRAPPC12	IMP		Human	PMID:25918224

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern