Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes TRAPPC2L
  • Mouse genes Trappc2l
  • Rat genes Trappc2l
  • Zfish genes trappc2l
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Trappc2l

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	TRAPPC2L	IPI	UniProtKB:O43617	Human	PMID:16189514
Molecular Function	GO:0005515	protein binding	TRAPPC2L	IPI	UniProtKB:O43617	Human	PMID:21453443
Molecular Function	GO:0005515	protein binding	TRAPPC2L	IPI	UniProtKB:O43617,UniProtKB:P0DI81,UniProtKB:P48553,UniProtKB:Q7Z392,UniProtKB:Q8WVT3,UniProtKB:Q9Y2L5	Human	PMID:21525244
Molecular Function	GO:0005515	protein binding	TRAPPC2L	IPI	UniProtKB:O43617,UniProtKB:P0DI81,UniProtKB:Q7Z392,UniProtKB:Q8WVT3	Human	PMID:21525244
Molecular Function	GO:0005515	protein binding	TRAPPC2L	IPI	UniProtKB:P0DI81	Human	PMID:21525244
Molecular Function	GO:0005515	protein binding	TRAPPC2L	IPI	UniProtKB:P48553,UniProtKB:Q7Z392,UniProtKB:Q8WVT3,UniProtKB:Q96Q05,UniProtKB:Q9Y2L5	Human	PMID:21525244
Molecular Function	GO:0005515	protein binding	TRAPPC2L	IPI	UniProtKB:O43617	Human	PMID:21827752
Molecular Function	GO:0005515	protein binding	TRAPPC2L	IPI	UniProtKB:O43617	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	TRAPPC2L	IPI	UniProtKB:P15884	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	TRAPPC2L	IPI	UniProtKB:Q04864	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	TRAPPC2L	IPI	UniProtKB:Q15654	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	TRAPPC2L	IPI	UniProtKB:Q8IYX8-2	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	TRAPPC2L	IPI	UniProtKB:Q96D71-2	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	TRAPPC2L	IPI	UniProtKB:Q96D71-3	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	TRAPPC2L	IPI	UniProtKB:Q9H2G9	Human	PMID:25416956
Cellular Component	GO:0005829	cytosol	TRAPPC2L	IDA		Human	GO_REF:0000052
Cellular Component	GO:0043231	intracellular membrane-bounded organelle	TRAPPC2L	IDA		Human	GO_REF:0000052
Cellular Component	GO:0030008	TRAPP complex	TRAPPC2L	IDA		Human	PMID:21525244

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern