Comparative GO Graph (mouse, human, rat)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes TREML4
  • Mouse genes Treml4
  • Rat genes Treml4
  • Zfish genes
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Treml4

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	Treml4	IPI	PR:O54885	Mouse	PMID:19155473
Cellular Component	GO:0005783	endoplasmic reticulum	Treml4	IDA		Mouse	MGI:MGI:5775261|PMID:25848864
Cellular Component	GO:0010008	endosome membrane	Treml4	IDA		Mouse	MGI:MGI:5775261|PMID:25848864
Cellular Component	GO:0005765	lysosomal membrane	Treml4	IDA		Mouse	MGI:MGI:5775261|PMID:25848864
Biological Process	GO:0006911	phagocytosis, engulfment	Treml4	IDA		Mouse	PMID:19155473
Biological Process	GO:0002230	positive regulation of defense response to virus by host	Treml4	IMP		Mouse	MGI:MGI:5775261|PMID:25848864
Biological Process	GO:0034181	positive regulation of toll-like receptor 13 signaling pathway	Treml4	IMP		Mouse	MGI:MGI:5775261|PMID:25848864
Biological Process	GO:0034157	positive regulation of toll-like receptor 7 signaling pathway	TREML4	IMP		Human	PMID:25848864
Biological Process	GO:0034157	positive regulation of toll-like receptor 7 signaling pathway	Treml4	IMP		Mouse	MGI:MGI:5775261|PMID:25848864
Biological Process	GO:0034165	positive regulation of toll-like receptor 9 signaling pathway	Treml4	IMP		Mouse	MGI:MGI:5775261|PMID:25848864
Biological Process	GO:0008104	protein localization	Treml4	IMP		Mouse	MGI:MGI:5775261|PMID:25848864
Biological Process	GO:0002457	T cell antigen processing and presentation	Treml4	IMP		Mouse	PMID:22210914

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern