Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes TRIM10
  • Mouse genes Trim10
  • Rat genes Trim10
  • Zfish genes btr01,btr02,btr09,btr12,btr30
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Trim10

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	TRIM10	IPI	UniProtKB:P25786	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	TRIM10	IPI	UniProtKB:Q5W5X9	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	TRIM10	IPI	UniProtKB:Q9UQR1	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	TRIM10	IPI	UniProtKB:P25786	Human	PMID:31515488
Molecular Function	GO:0005515	protein binding	TRIM10	IPI	UniProtKB:Q5W5X9	Human	PMID:31515488
Molecular Function	GO:0005515	protein binding	Trim10	IPI	PR:Q9WUH5	Mouse	PMID:11331580
Cellular Component	GO:0005737	cytoplasm	Trim10	IDA		Mouse	PMID:11331580
Biological Process	GO:0030218	erythrocyte differentiation	Trim10	IDA		Mouse	PMID:10207104
Biological Process	GO:0045087	innate immune response	Trim10	IDA		Mouse	MGI:MGI:5545996|PMID:18248090
Biological Process	GO:0046597	negative regulation of viral entry into host cell	Trim10	IDA		Mouse	MGI:MGI:5545996|PMID:18248090
Biological Process	GO:0001666	response to hypoxia	btr01	IMP	ZFIN:ZDB-MRPHLNO-150826-6	Zfish	PMID:25840431

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern