Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes TRIM31
  • Mouse genes Trim31
  • Rat genes Trim31
  • Zfish genes si:ch211-114c12.5,si:ch211-120g10.1,si:ch73-364h19.2,si:dkey-18p12.4,si:dkey-219e21.2,zgc:194990
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Trim31

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	TRIM31	IPI	UniProtKB:P43355	Human	PMID:16189514
Molecular Function	GO:0005515	protein binding	TRIM31	IPI	UniProtKB:P43355	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	TRIM31	IPI	UniProtKB:P40227	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TRIM31	IPI	UniProtKB:P61086	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TRIM31	IPI	UniProtKB:P61086	Human	PMID:32814053
Molecular Function	GO:0003713	transcription coactivator activity	TRIM31	IDA		Human	PMID:23077300
Molecular Function	GO:0061630	ubiquitin protein ligase activity	TRIM31	IDA		Human	PMID:27929086
Molecular Function	GO:0061630	ubiquitin protein ligase activity	TRIM31	IDA		Human	PMID:27992402
Molecular Function	GO:0061630	ubiquitin protein ligase activity	Trim31	IDA		Mouse	MGI:MGI:5907951|PMID:27929086
Molecular Function	GO:0061630	ubiquitin protein ligase activity	Trim31	IDA		Mouse	MGI:MGI:6306832|PMID:27992402
Cellular Component	GO:0005739	mitochondrion	TRIM31	IDA		Human	PMID:27992402
Biological Process	GO:0140374	antiviral innate immune response	TRIM31	IDA		Human	PMID:27992402
Biological Process	GO:0140374	antiviral innate immune response	Trim31	IMP		Mouse	MGI:MGI:6306832|PMID:27992402
Biological Process	GO:0051607	defense response to virus	TRIM31	IDA		Human	PMID:27992402
Biological Process	GO:0051607	defense response to virus	Trim31	IMP		Mouse	MGI:MGI:6306832|PMID:27992402
Biological Process	GO:0045087	innate immune response	TRIM31	IMP		Human	PMID:18248090
Biological Process	GO:0045087	innate immune response	Trim31	IDA		Mouse	MGI:MGI:5545996|PMID:18248090
Biological Process	GO:1900226	negative regulation of NLRP3 inflammasome complex assembly	TRIM31	IDA		Human	PMID:27929086
Biological Process	GO:1900226	negative regulation of NLRP3 inflammasome complex assembly	Trim31	IDA		Mouse	MGI:MGI:5907951|PMID:27929086
Biological Process	GO:0046597	negative regulation of viral entry into host cell	TRIM31	IMP		Human	PMID:18248090
Biological Process	GO:0046597	negative regulation of viral entry into host cell	Trim31	IDA		Mouse	MGI:MGI:5545996|PMID:18248090
Biological Process	GO:0032897	negative regulation of viral transcription	TRIM31	IDA		Human	PMID:18248090
Biological Process	GO:0051091	positive regulation of DNA-binding transcription factor activity	TRIM31	IMP		Human	PMID:23077300
Biological Process	GO:0070936	protein K48-linked ubiquitination	TRIM31	IDA		Human	PMID:27929086
Biological Process	GO:0070936	protein K48-linked ubiquitination	Trim31	IDA		Mouse	MGI:MGI:5907951|PMID:27929086
Biological Process	GO:0070534	protein K63-linked ubiquitination	TRIM31	IDA		Human	PMID:27992402
Biological Process	GO:0006511	ubiquitin-dependent protein catabolic process	TRIM31	IDA		Human	PMID:27929086
Biological Process	GO:0006511	ubiquitin-dependent protein catabolic process	Trim31	IDA		Mouse	MGI:MGI:5907951|PMID:27929086
Biological Process	GO:0019076	viral release from host cell	TRIM31	IMP		Human	PMID:18248090

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern