Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes TRIM33
  • Mouse genes Trim33
  • Rat genes Trim33
  • Zfish genes trim33
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Trim33

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0070410	co-SMAD binding	TRIM33	IPI	UniProtKB:Q13485	Human	PMID:19135894
Molecular Function	GO:1990841	promoter-specific chromatin binding	Trim33	IDA		Mouse	PMID:26624618
Molecular Function	GO:0005515	protein binding	TRIM33	IPI	UniProtKB:Q13485	Human	PMID:19135894
Molecular Function	GO:0005515	protein binding	TRIM33	IPI	UniProtKB:Q15796	Human	PMID:19135894
Molecular Function	GO:0005515	protein binding	TRIM33	IPI	UniProtKB:Q13485	Human	PMID:20603019
Molecular Function	GO:0005515	protein binding	TRIM33	IPI	UniProtKB:Q15796	Human	PMID:20603019
Molecular Function	GO:0005515	protein binding	TRIM33	IPI	UniProtKB:Q13485	Human	PMID:21597466
Molecular Function	GO:0005515	protein binding	Trim33	IPI	UniProtKB:Q64127	Mouse	MGI:MGI:5008353|PMID:21531907
Molecular Function	GO:0070412	R-SMAD binding	TRIM33	IPI	UniProtKB:Q15796	Human	PMID:19135894
Molecular Function	GO:0061630	ubiquitin protein ligase activity	Trim33	IDA		Mouse	PMID:26624618
Cellular Component	GO:0005634	nucleus	TRIM33	IDA		Human	PMID:19135894
Cellular Component	GO:0005634	nucleus	TRIM33	IDA		Human	PMID:25593309
Cellular Component	GO:0005634	nucleus	Trim33	IDA		Mouse	PMID:15314655
Biological Process	GO:0048066	developmental pigmentation	trim33	IMP	ZFIN:ZDB-GENO-980202-1308	Zfish	PMID:9007256
Biological Process	GO:0048066	developmental pigmentation	trim33	IMP	ZFIN:ZDB-GENO-980202-1305	Zfish	PMID:9007256
Biological Process	GO:0048066	developmental pigmentation	trim33	IMP	ZFIN:ZDB-GENO-980202-1302	Zfish	PMID:9007256
Biological Process	GO:0048066	developmental pigmentation	trim33	IMP	ZFIN:ZDB-GENO-980202-974	Zfish	PMID:9007256
Biological Process	GO:0048066	developmental pigmentation	trim33	IMP	ZFIN:ZDB-GENO-980202-1304	Zfish	PMID:9007256
Biological Process	GO:0048066	developmental pigmentation	trim33	IMP	ZFIN:ZDB-GENO-980202-1303	Zfish	PMID:9007256
Biological Process	GO:0048066	developmental pigmentation	trim33	IMP	ZFIN:ZDB-GENO-980202-1309	Zfish	PMID:9007256
Biological Process	GO:0048066	developmental pigmentation	trim33	IMP	ZFIN:ZDB-GENO-980202-1306	Zfish	PMID:9007256
Biological Process	GO:0035162	embryonic hemopoiesis	trim33	IMP	ZFIN:ZDB-GENO-980202-1306	Zfish	PMID:9007251
Biological Process	GO:0035162	embryonic hemopoiesis	trim33	IMP	ZFIN:ZDB-GENO-980202-1304	Zfish	PMID:9007251
Biological Process	GO:0035162	embryonic hemopoiesis	trim33	IMP	ZFIN:ZDB-GENO-980202-1309	Zfish	PMID:9007251
Biological Process	GO:0035162	embryonic hemopoiesis	trim33	IMP	ZFIN:ZDB-GENO-980202-1305	Zfish	PMID:9007251
Biological Process	GO:0035162	embryonic hemopoiesis	trim33	IMP	ZFIN:ZDB-GENO-980202-1308	Zfish	PMID:9007251
Biological Process	GO:0035162	embryonic hemopoiesis	trim33	IMP	ZFIN:ZDB-GENO-980202-1302	Zfish	PMID:9007251
Biological Process	GO:0035162	embryonic hemopoiesis	trim33	IMP	ZFIN:ZDB-GENO-980202-974	Zfish	PMID:9007251
Biological Process	GO:0035162	embryonic hemopoiesis	trim33	IMP	ZFIN:ZDB-GENO-980202-1309	Zfish	PMID:15314655
Biological Process	GO:0035162	embryonic hemopoiesis	trim33	IMP	ZFIN:ZDB-GENO-980202-1303	Zfish	PMID:9007251
Biological Process	GO:0030218	erythrocyte differentiation	trim33	IMP	ZFIN:ZDB-GENO-101022-4	Zfish	PMID:20603019
Biological Process	GO:0030218	erythrocyte differentiation	trim33	IGI	ZFIN:ZDB-GENO-101021-4	Zfish	PMID:20603019
Biological Process	GO:0033333	fin development	trim33	IMP		Zfish	PMID:9007245
Biological Process	GO:0010467	gene expression	Trim33	IMP	MGI:MGI:6281716	Mouse	PMID:26624618
Biological Process	GO:0048246	macrophage chemotaxis	trim33	IMP	ZFIN:ZDB-GENO-180221-1	Zfish	PMID:28724755
Biological Process	GO:1905517	macrophage migration	trim33	IMP	ZFIN:ZDB-GENO-180221-2	Zfish	PMID:28724755
Biological Process	GO:1905517	macrophage migration	trim33	IMP	ZFIN:ZDB-MRPHLNO-171024-2	Zfish	PMID:28724755
Biological Process	GO:1905517	macrophage migration	trim33	IMP	ZFIN:ZDB-GENO-180221-1	Zfish	PMID:28724755
Biological Process	GO:0030514	negative regulation of BMP signaling pathway	TRIM33	IDA		Human	PMID:19135894
Biological Process	GO:0030593	neutrophil chemotaxis	trim33	IMP	ZFIN:ZDB-GENO-180221-1	Zfish	PMID:28724755
Biological Process	GO:1990266	neutrophil migration	trim33	IMP	ZFIN:ZDB-GENO-180221-1	Zfish	PMID:28724755
Biological Process	GO:0035166	post-embryonic hemopoiesis	trim33	IMP	ZFIN:ZDB-GENO-980202-1306	Zfish	PMID:15314655
Biological Process	GO:0060215	primitive hemopoiesis	trim33	IMP	ZFIN:ZDB-GENO-980202-303	Zfish	PMID:9007250
Biological Process	GO:0060215	primitive hemopoiesis	trim33	IMP	ZFIN:ZDB-GENO-090313-1	Zfish	PMID:9007250
Biological Process	GO:0016567	protein ubiquitination	TRIM33	IDA		Human	PMID:19135894
Biological Process	GO:0034243	regulation of transcription elongation by RNA polymerase II	trim33	IGI	ZFIN:ZDB-GENO-101022-4,ZFIN:ZDB-MRPHLNO-100823-6	Zfish	PMID:20603019
Biological Process	GO:0017015	regulation of transforming growth factor beta receptor signaling pathway	TRIM33	IDA		Human	PMID:19135894

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern