Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes TRIM50,TRIM73,TRIM74
  • Mouse genes Trim50
  • Rat genes Trim50
  • Zfish genes trim47
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Trim50

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0042802	identical protein binding	TRIM50	IPI	UniProtKB:Q86XT4	Human	PMID:22829933
Molecular Function	GO:0042802	identical protein binding	TRIM50	IPI	UniProtKB:Q86XT4	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TRIM50	IPI	UniProtKB:A6H8Z2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TRIM50	IPI	UniProtKB:O60733	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TRIM50	IPI	UniProtKB:O75604	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TRIM50	IPI	UniProtKB:O75928-2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TRIM50	IPI	UniProtKB:O95198	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TRIM50	IPI	UniProtKB:P14373	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TRIM50	IPI	UniProtKB:P49760	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TRIM50	IPI	UniProtKB:P51668	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TRIM50	IPI	UniProtKB:P54725	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TRIM50	IPI	UniProtKB:P57075-2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TRIM50	IPI	UniProtKB:P61086	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TRIM50	IPI	UniProtKB:P62837	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TRIM50	IPI	UniProtKB:Q07002	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TRIM50	IPI	UniProtKB:Q12933	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TRIM50	IPI	UniProtKB:Q3SY00	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TRIM50	IPI	UniProtKB:Q5JST6	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TRIM50	IPI	UniProtKB:Q6FHY5	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TRIM50	IPI	UniProtKB:Q6GPH4	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TRIM50	IPI	UniProtKB:Q6ZNG0	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TRIM50	IPI	UniProtKB:Q7L775	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TRIM50	IPI	UniProtKB:Q7Z4V0	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TRIM50	IPI	UniProtKB:Q8NA54	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TRIM50	IPI	UniProtKB:Q8TBB1	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TRIM50	IPI	UniProtKB:Q92619	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TRIM50	IPI	UniProtKB:Q969R5	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TRIM50	IPI	UniProtKB:Q969T4	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TRIM50	IPI	UniProtKB:Q96CN9	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TRIM50	IPI	UniProtKB:Q96LR5	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TRIM50	IPI	UniProtKB:Q96N21	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TRIM50	IPI	UniProtKB:Q96PN8	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TRIM50	IPI	UniProtKB:Q9HAC8	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TRIM50	IPI	UniProtKB:Q9NZD8	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TRIM50	IPI	UniProtKB:Q9UHP6	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TRIM50	IPI	UniProtKB:Q9Y2X8	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	Trim50	IPI	PR:Q9Z2V5	Mouse	PMID:22792322
Molecular Function	GO:0005515	protein binding	Trim50	IPI	PR:Q64337	Mouse	PMID:22792322
Cellular Component	GO:0016235	aggresome	Trim50	IDA		Mouse	PMID:22792322
Cellular Component	GO:0005829	cytosol	TRIM74	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005829	cytosol	TRIM73	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005829	cytosol	TRIM50	IDA		Human	GO_REF:0000052
Biological Process	GO:0070201	regulation of establishment of protein localization	Trim50	IDA		Mouse	PMID:22792322

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern