Comparative GO Graph (mouse, human, rat)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes TRIM52
  • Mouse genes Trim52
  • Rat genes Trim52
  • Zfish genes
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Trim52

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0003713	transcription coactivator activity	TRIM52	IDA		Human	PMID:23077300
Molecular Function	GO:0061630	ubiquitin protein ligase activity	TRIM52	IDA		Human	PMID:27667714
Cellular Component	GO:0005737	cytoplasm	TRIM52	IDA		Human	PMID:28073078
Cellular Component	GO:0005829	cytosol	TRIM52	IDA		Human	PMID:27667714
Cellular Component	GO:0005634	nucleus	TRIM52	IDA		Human	PMID:27667714
Cellular Component	GO:0005634	nucleus	TRIM52	IDA		Human	PMID:28073078
Biological Process	GO:0051607	defense response to virus	TRIM52	IDA		Human	PMID:27667714
Biological Process	GO:0043123	positive regulation of I-kappaB kinase/NF-kappaB signaling	TRIM52	IDA		Human	PMID:27667714
Biological Process	GO:0043123	positive regulation of I-kappaB kinase/NF-kappaB signaling	TRIM52	IDA		Human	PMID:28073078
Biological Process	GO:0051092	positive regulation of NF-kappaB transcription factor activity	TRIM52	IDA		Human	PMID:23077300
Biological Process	GO:0051865	protein autoubiquitination	TRIM52	IDA		Human	PMID:27667714
Biological Process	GO:0016567	protein ubiquitination	TRIM52	IDA		Human	PMID:27667714

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern