Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes TRIM62
  • Mouse genes Trim62
  • Rat genes Trim62
  • Zfish genes trim62.1,trim62.2
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Trim62

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0042802	identical protein binding	TRIM62	IPI	UniProtKB:Q9BVG3	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TRIM62	IPI	UniProtKB:O14933	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TRIM62	IPI	UniProtKB:O94888	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TRIM62	IPI	UniProtKB:O95208-2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TRIM62	IPI	UniProtKB:P35754	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TRIM62	IPI	UniProtKB:P51668	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TRIM62	IPI	UniProtKB:P61077	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TRIM62	IPI	UniProtKB:Q68CQ4	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TRIM62	IPI	UniProtKB:Q6NYC8	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TRIM62	IPI	UniProtKB:Q8TDD2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TRIM62	IPI	UniProtKB:Q969T4	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TRIM62	IPI	UniProtKB:Q96JC9	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TRIM62	IPI	UniProtKB:Q9NQT4	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TRIM62	IPI	UniProtKB:Q9NVQ4-2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TRIM62	IPI	UniProtKB:Q9P0N9	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TRIM62	IPI	UniProtKB:Q9Y2X8	Human	PMID:32296183
Molecular Function	GO:0003713	transcription coactivator activity	TRIM62	IDA		Human	PMID:23077300
Molecular Function	GO:0004842	ubiquitin-protein transferase activity	TRIM62	IDA		Human	PMID:23402750
Molecular Function	GO:0004842	ubiquitin-protein transferase activity	TRIM62	IDA		Human	PMID:26488816
Cellular Component	GO:0005737	cytoplasm	TRIM62	IDA		Human	PMID:26488816
Cellular Component	GO:0005737	cytoplasm	TRIM62	IDA		Human	PMID:23402750
Biological Process	GO:0045087	innate immune response	TRIM62	IMP		Human	PMID:18248090
Biological Process	GO:0010719	negative regulation of epithelial to mesenchymal transition	Trim62	IMP		Mouse	PMID:24890125
Biological Process	GO:0010719	negative regulation of epithelial to mesenchymal transition	Trim62	IMP	MGI:MGI:5538538	Mouse	PMID:24890125
Biological Process	GO:0032897	negative regulation of viral transcription	TRIM62	IDA		Human	PMID:18248090
Biological Process	GO:1905036	positive regulation of antifungal innate immune response	TRIM62	IDA		Human	PMID:26488816
Biological Process	GO:1905036	positive regulation of antifungal innate immune response	Trim62	IMP		Mouse	MGI:MGI:5788367|PMID:26488816
Biological Process	GO:0051091	positive regulation of DNA-binding transcription factor activity	TRIM62	IMP		Human	PMID:23077300
Biological Process	GO:0043123	positive regulation of I-kappaB kinase/NF-kappaB signaling	TRIM62	IDA		Human	PMID:23077300
Biological Process	GO:0051092	positive regulation of NF-kappaB transcription factor activity	TRIM62	IMP		Human	PMID:23077300
Biological Process	GO:0044314	protein K27-linked ubiquitination	TRIM62	IDA		Human	PMID:26488816
Biological Process	GO:0046596	regulation of viral entry into host cell	TRIM62	IDA		Human	PMID:18248090
Biological Process	GO:0019076	viral release from host cell	TRIM62	IMP		Human	PMID:18248090

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern