Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes TRIM7
  • Mouse genes Trim7
  • Rat genes Trim7
  • Zfish genes trim69
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Trim7

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	TRIM7	IPI	UniProtKB:Q8IUQ4	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	TRIM7	IPI	UniProtKB:A0A2R8YD28	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TRIM7	IPI	UniProtKB:P07315	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TRIM7	IPI	UniProtKB:P07998	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TRIM7	IPI	UniProtKB:P29972	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TRIM7	IPI	UniProtKB:P50895	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TRIM7	IPI	UniProtKB:P52657	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TRIM7	IPI	UniProtKB:P57060	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TRIM7	IPI	UniProtKB:P61019	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TRIM7	IPI	UniProtKB:Q13671	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TRIM7	IPI	UniProtKB:Q5VZE5	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TRIM7	IPI	UniProtKB:Q7L8S5	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TRIM7	IPI	UniProtKB:Q8NBR0	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TRIM7	IPI	UniProtKB:Q8TBZ6	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TRIM7	IPI	UniProtKB:Q96AH0	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TRIM7	IPI	UniProtKB:Q9NWZ3	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TRIM7	IPI	UniProtKB:Q9UBT7	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TRIM7	IPI	UniProtKB:Q9UHP6	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TRIM7	IPI	UniProtKB:Q9UI95	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TRIM7	IPI	UniProtKB:Q9Y281	Human	PMID:32296183
Cellular Component	GO:0005737	cytoplasm	TRIM7	IDA		Human	PMID:11331580
Cellular Component	GO:0005737	cytoplasm	Trim7	IDA		Mouse	PMID:11331580
Cellular Component	GO:0005634	nucleus	TRIM7	IDA		Human	PMID:11331580
Cellular Component	GO:0005634	nucleus	Trim7	IDA		Mouse	PMID:11331580
Biological Process	GO:0007420	brain development	trim69	IMP	ZFIN:ZDB-MRPHLNO-160728-3	Zfish	PMID:27050765
Biological Process	GO:0007420	brain development	trim69	IGI	ZFIN:ZDB-MRPHLNO-080908-1,ZFIN:ZDB-MRPHLNO-160728-3	Zfish	PMID:27050765
Biological Process	GO:0042981	regulation of apoptotic process	trim69	IMP	ZFIN:ZDB-MRPHLNO-160728-3	Zfish	PMID:27031046

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern