Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes TRIM9
  • Mouse genes Trim9
  • Rat genes Trim9
  • Zfish genes trim9
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Trim9

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	TRIM9	IPI	UniProtKB:P50552	Human	PMID:16189514
Molecular Function	GO:0005515	protein binding	TRIM9	IPI	UniProtKB:Q9Y297	Human	PMID:16189514
Molecular Function	GO:0005515	protein binding	TRIM9	IPI	UniProtKB:P48730	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	TRIM9	IPI	UniProtKB:Q2TBE0	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	TRIM9	IPI	UniProtKB:Q8NI38	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	TRIM9	IPI	UniProtKB:Q969S9	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	TRIM9	IPI	UniProtKB:Q969V5	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	TRIM9	IPI	UniProtKB:Q96PN8	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	TRIM9	IPI	UniProtKB:Q9NZD8	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	TRIM9	IPI	UniProtKB:Q9UI08	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	TRIM9	IPI	UniProtKB:Q9Y297	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	TRIM9	IPI	UniProtKB:Q9Y2T2	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	TRIM9	IPI	UniProtKB:B7Z3H4	Human	PMID:26871637
Molecular Function	GO:0005515	protein binding	TRIM9	IPI	UniProtKB:P50552	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TRIM9	IPI	UniProtKB:Q2TBE0	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TRIM9	IPI	UniProtKB:Q68CQ4	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TRIM9	IPI	UniProtKB:Q86YD7	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TRIM9	IPI	UniProtKB:Q96HA8	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TRIM9	IPI	UniProtKB:Q9H5Z6-2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TRIM9	IPI	UniProtKB:Q9NZD8	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TRIM9	IPI	UniProtKB:Q9UI08-2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TRIM9	IPI	UniProtKB:Q9Y297	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TRIM9	IPI	UniProtKB:O60333-2	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	TRIM9	IPI	UniProtKB:P05067	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	TRIM9	IPI	UniProtKB:P54253	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	TRIM9	IPI	UniProtKB:Q13148	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	Trim9	IPI	PR:Q8BGE7	Mouse	PMID:11331580
Molecular Function	GO:0019904	protein domain specific binding	TRIM9	IPI	UniProtKB:P43146	Human	PMID:22084112
Molecular Function	GO:0019904	protein domain specific binding	TRIM9	IPI	UniProtKB:Q7Z5R6	Human	PMID:22084112
Molecular Function	GO:0019904	protein domain specific binding	TRIM9	IPI	UniProtKB:Q92859	Human	PMID:22084112
Molecular Function	GO:0042803	protein homodimerization activity	TRIM9	IPI	UniProtKB:Q9C026	Human	PMID:11331580
Molecular Function	GO:0000149	SNARE binding	Trim9	IPI	RGD:3728	Rat	PMID:11524423|RGD:631246
Molecular Function	GO:0061630	ubiquitin protein ligase activity	TRIM9	IDA		Human	PMID:20085810
Cellular Component	GO:0005737	cytoplasm	TRIM9	IDA		Human	PMID:11331580
Cellular Component	GO:0005737	cytoplasm	TRIM9	IDA		Human	PMID:20085810
Cellular Component	GO:0005737	cytoplasm	Trim9	IDA		Mouse	PMID:11331580
Cellular Component	GO:0005856	cytoskeleton	Trim9	IDA		Rat	PMID:11152476|RGD:633988
Cellular Component	GO:0030425	dendrite	TRIM9	IDA		Human	PMID:20085810
Cellular Component	GO:0030425	dendrite	Trim9	IDA		Mouse	MGI:MGI:4820701|PMID:20085810
Cellular Component	GO:0099523	presynaptic cytosol	Trim9	IDA		Rat	PMID:11524423|RGD:631246
Cellular Component	GO:0008021	synaptic vesicle	Trim9	IDA		Rat	PMID:11524423|RGD:631246
Cellular Component	GO:0008021	synaptic vesicle	Trim9	IMP		Rat	PMID:11524423|RGD:631246
Biological Process	GO:0045955	negative regulation of calcium ion-dependent exocytosis	Trim9	IMP		Rat	PMID:11524423|RGD:631246
Biological Process	GO:0035544	negative regulation of SNARE complex assembly	Trim9	IDA		Rat	PMID:11524423|RGD:631246
Biological Process	GO:0043161	proteasome-mediated ubiquitin-dependent protein catabolic process	TRIM9	IDA		Human	PMID:20085810
Biological Process	GO:0016079	synaptic vesicle exocytosis	Trim9	IEP		Rat	PMID:11524423|RGD:631246

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern