Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes TRIP4
  • Mouse genes Trip4
  • Rat genes Trip4
  • Zfish genes trip4
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Trip4

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0035035	histone acetyltransferase binding	TRIP4	IPI	UniProtKB:Q09472	Human	PMID:25219498
Molecular Function	GO:0030331	nuclear estrogen receptor binding	TRIP4	IPI	UniProtKB:P03372	Human	PMID:25219498
Molecular Function	GO:0016922	nuclear receptor binding	TRIP4	IDA		Human	PMID:10454579
Molecular Function	GO:0002020	protease binding	TRIP4	IPI	UniProtKB:Q9NUQ7	Human	PMID:25219498
Molecular Function	GO:0005515	protein binding	TRIP4	IPI	UniProtKB:Q15788	Human	PMID:25219498
Molecular Function	GO:0005515	protein binding	TRIP4	IPI	UniProtKB:Q96HY6	Human	PMID:25219498
Molecular Function	GO:0019901	protein kinase binding	TRIP4	IPI	UniProtKB:Q9HC98	Human	PMID:20873783
Molecular Function	GO:0003713	transcription coactivator activity	TRIP4	IMP		Human	PMID:25219498
Molecular Function	GO:0044389	ubiquitin-like protein ligase binding	TRIP4	IPI	UniProtKB:O94874	Human	PMID:25219498
Cellular Component	GO:0099053	activating signal cointegrator 1 complex	TRIP4	IDA		Human	PMID:12077347
Cellular Component	GO:0005813	centrosome	TRIP4	IDA		Human	PMID:20873783
Cellular Component	GO:0005737	cytoplasm	TRIP4	IDA		Human	PMID:10454579
Cellular Component	GO:0031594	neuromuscular junction	TRIP4	IMP		Human	PMID:26924529
Cellular Component	GO:0016604	nuclear body	TRIP4	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005654	nucleoplasm	TRIP4	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005634	nucleus	TRIP4	IDA		Human	PMID:10454579
Cellular Component	GO:0005634	nucleus	TRIP4	IDA		Human	PMID:12077347
Cellular Component	GO:0005634	nucleus	TRIP4	IDA		Human	PMID:25219498
Cellular Component	GO:0005634	nucleus	TRIP4	IDA		Human	PMID:26924529
Cellular Component	GO:0032991	protein-containing complex	TRIP4	IDA		Human	PMID:20873783
Biological Process	GO:0007409	axonogenesis	trip4	IMP	ZFIN:ZDB-MRPHLNO-160509-3	Zfish	PMID:26924529
Biological Process	GO:0007409	axonogenesis	trip4	IMP	ZFIN:ZDB-MRPHLNO-160509-1	Zfish	PMID:26924529
Biological Process	GO:0030520	intracellular estrogen receptor signaling pathway	TRIP4	IDA		Human	PMID:25219498
Biological Process	GO:0061055	myotome development	trip4	IMP	ZFIN:ZDB-MRPHLNO-160509-1	Zfish	PMID:26924529
Biological Process	GO:0007528	neuromuscular junction development	trip4	IMP	ZFIN:ZDB-MRPHLNO-160509-1	Zfish	PMID:26924529
Biological Process	GO:0007528	neuromuscular junction development	trip4	IMP	ZFIN:ZDB-MRPHLNO-160509-3	Zfish	PMID:26924529
Biological Process	GO:0045893	positive regulation of DNA-templated transcription	TRIP4	IMP		Human	PMID:25219498
Biological Process	GO:0006355	regulation of DNA-templated transcription	TRIP4	IDA		Human	PMID:12077347
Biological Process	GO:0006355	regulation of DNA-templated transcription	TRIP4	IMP		Human	PMID:26924529
Biological Process	GO:0045661	regulation of myoblast differentiation	Trip4	IMP		Mouse	MGI:MGI:5779448|PMID:27008887
Biological Process	GO:0072344	rescue of stalled ribosome	TRIP4	IMP		Human	PMID:32099016
Biological Process	GO:1990116	ribosome-associated ubiquitin-dependent protein catabolic process	TRIP4	IMP		Human	PMID:32099016
Biological Process	GO:0001966	thigmotaxis	trip4	IMP	ZFIN:ZDB-MRPHLNO-160509-1	Zfish	PMID:26924529
Biological Process	GO:1901998	toxin transport	Trip4	IMP		Mouse	PMID:23716698

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern