Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes TRMT2A
  • Mouse genes Trmt2a
  • Rat genes Trmt2a
  • Zfish genes trmt2a
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Trmt2a

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0008169	C-methyltransferase activity	TRMT2A	IDA		Human	PMID:34123281
Molecular Function	GO:0008169	C-methyltransferase activity	TRMT2A	IDA		Human	PMID:34556860
Molecular Function	GO:0005515	protein binding	TRMT2A	IPI	UniProtKB:P23508	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TRMT2A	IPI	UniProtKB:Q08117-2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TRMT2A	IPI	UniProtKB:Q14696	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TRMT2A	IPI	UniProtKB:Q6FHY5	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TRMT2A	IPI	UniProtKB:Q92624	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TRMT2A	IPI	UniProtKB:Q96EG3	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TRMT2A	IPI	UniProtKB:Q9NRD5	Human	PMID:32296183
Molecular Function	GO:0003723	RNA binding	TRMT2A	HDA		Human	PMID:22658674
Molecular Function	GO:0030697	S-adenosylmethionine-dependent tRNA (m5U54) methyltransferase activity	TRMT2A	IDA		Human	PMID:31361898
Molecular Function	GO:0030697	S-adenosylmethionine-dependent tRNA (m5U54) methyltransferase activity	TRMT2A	IDA		Human	PMID:33799331

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern