Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes TRNAU1AP
  • Mouse genes Trnau1ap
  • Rat genes Trnau1ap
  • Zfish genes trnau1apa,trnau1apb
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Trnau1ap

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	TRNAU1AP	IPI	UniProtKB:P27797	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	TRNAU1AP	IPI	UniProtKB:P36957	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	TRNAU1AP	IPI	UniProtKB:Q8TDX7	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	TRNAU1AP	IPI	UniProtKB:Q92876	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	Trnau1ap	IPI	UniProtKB:Q6P6M7	Mouse	MGI:MGI:3689806|PMID:16230358
Molecular Function	GO:0003723	RNA binding	TRNAU1AP	HDA		Human	PMID:22658674
Molecular Function	GO:0003723	RNA binding	TRNAU1AP	HDA		Human	PMID:22681889
Molecular Function	GO:0000049	tRNA binding	Trnau1ap	IDA		Rat	PMID:10606267|RGD:633938
Cellular Component	GO:0005634	nucleus	Trnau1ap	IDA		Mouse	MGI:MGI:3689806|PMID:16230358
Biological Process	GO:0001514	selenocysteine incorporation	Trnau1ap	IDA		Mouse	MGI:MGI:3689806|PMID:16230358

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern