Comparative GO Graph (mouse, human)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes TSIX
  • Mouse genes Tsix
  • Rat genes
  • Zfish genes
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Tsix

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	Tsix	IPI	PR:E9Q3T6	Mouse	PMID:24268575
Molecular Function	GO:0044877	protein-containing complex binding	Tsix	IDA		Mouse	PMID:21172659
Biological Process	GO:0009048	dosage compensation by inactivation of X chromosome	Tsix	IGI	MGI:MGI:98974	Mouse	PMID:15992549
Biological Process	GO:0009048	dosage compensation by inactivation of X chromosome	Tsix	IMP	MGI:MGI:2679786	Mouse	PMID:15992549
Biological Process	GO:0060817	inactivation of paternal X chromosome	Tsix	IMP	MGI:MGI:2387816	Mouse	PMID:24268575
Biological Process	GO:0000122	negative regulation of transcription by RNA polymerase II	Tsix	IGI	MGI:MGI:2180008	Mouse	PMID:21029862
Biological Process	GO:0045815	transcription initiation-coupled chromatin remodeling	Tsix	IMP	MGI:MGI:2679786	Mouse	PMID:15992549

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern