Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes TTC5
  • Mouse genes Ttc5
  • Rat genes Ttc5
  • Zfish genes ttc5
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Ttc5

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0003682	chromatin binding	Ttc5	IDA		Mouse	PMID:22362889
Molecular Function	GO:0003677	DNA binding	Ttc5	IDA		Mouse	PMID:22362889
Molecular Function	GO:0005515	protein binding	TTC5	IPI	UniProtKB:Q13554	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	TTC5	IPI	UniProtKB:Q13557	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	TTC5	IPI	UniProtKB:Q13557	Human	PMID:31515488
Molecular Function	GO:0005515	protein binding	TTC5	IPI	UniProtKB:Q13554-3	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TTC5	IPI	UniProtKB:Q13555-5	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TTC5	IPI	UniProtKB:Q13557-8	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TTC5	IPI	UniProtKB:Q6NZI2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TTC5	IPI	UniProtKB:Q7Z353	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TTC5	IPI	UniProtKB:Q96D03	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TTC5	IPI	UniProtKB:Q9NYA3	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TTC5	IPI	UniProtKB:Q9UQM7	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	Ttc5	IPI	UniProtKB:Q8N9B5	Mouse	MGI:MGI:6810703|PMID:30420355
Molecular Function	GO:0005515	protein binding	Ttc5	IPI	UniProtKB:P04637|UniProtKB:P06576	Mouse	MGI:MGI:6810704|PMID:25168243
Molecular Function	GO:0005515	protein binding	Ttc5	IPI	UniProtKB:Q00613|UniProtKB:Q09472	Mouse	MGI:MGI:6810706|PMID:18451878
Molecular Function	GO:0005515	protein binding	Ttc5	IPI	UniProtKB:O14744	Mouse	MGI:MGI:6810705|PMID:19011621
Molecular Function	GO:0005515	protein binding	Ttc5	IPI	UniProtKB:Q3UA06	Mouse	MGI:MGI:6294232|PMID:28256593
Molecular Function	GO:0005515	protein binding	Ttc5	IPI	UniProtKB:Q09472|UniProtKB:Q9QXM1	Mouse	MGI:MGI:6828905|PMID:11511361
Molecular Function	GO:0043022	ribosome binding	TTC5	IMP		Human	PMID:31727855
Cellular Component	GO:0005737	cytoplasm	Ttc5	IDA		Mouse	PMID:22362889
Cellular Component	GO:0031410	cytoplasmic vesicle	Ttc5	IDA		Mouse	MGI:MGI:6810703|PMID:30420355
Cellular Component	GO:0005829	cytosol	TTC5	IDA		Human	PMID:31727855
Cellular Component	GO:0005829	cytosol	Ttc5	IDA		Mouse	MGI:MGI:6810701|PMID:18833288
Cellular Component	GO:0005829	cytosol	Ttc5	IDA		Mouse	MGI:MGI:6810704|PMID:25168243
Cellular Component	GO:0005829	cytosol	Ttc5	IDA		Mouse	MGI:MGI:6810702|PMID:15448695
Cellular Component	GO:0005739	mitochondrion	Ttc5	IDA		Mouse	MGI:MGI:6810704|PMID:25168243
Cellular Component	GO:0005654	nucleoplasm	TTC5	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005634	nucleus	Ttc5	IDA		Mouse	MGI:MGI:6810701|PMID:18833288
Cellular Component	GO:0005634	nucleus	Ttc5	IDA		Mouse	MGI:MGI:6810702|PMID:15448695
Cellular Component	GO:0005634	nucleus	Ttc5	IDA		Mouse	PMID:22362889
Biological Process	GO:0009267	cellular response to starvation	Ttc5	IMP		Mouse	MGI:MGI:6810703|PMID:30420355
Biological Process	GO:0006974	DNA damage response	Ttc5	IMP		Mouse	MGI:MGI:6810702|PMID:15448695
Biological Process	GO:0006974	DNA damage response	Ttc5	IDA		Mouse	MGI:MGI:6810701|PMID:18833288
Biological Process	GO:0061014	positive regulation of mRNA catabolic process	TTC5	IMP		Human	PMID:31727855
Biological Process	GO:0045944	positive regulation of transcription by RNA polymerase II	Ttc5	IGI	MGI:MGI:98834	Mouse	PMID:22362889

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern