Comparative GO Graph (mouse, human)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes TUG1
  • Mouse genes Tug1
  • Rat genes
  • Zfish genes
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Tug1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0000987	cis-regulatory region sequence-specific DNA binding	Tug1	IDA		Mouse	PMID:27760051
Molecular Function	GO:0005515	protein binding	Tug1	IPI	PR:O70343	Mouse	PMID:27760051
Cellular Component	GO:0005737	cytoplasm	Tug1	IDA		Mouse	PMID:32894169
Cellular Component	GO:0005737	cytoplasm	Tug1	IDA		Mouse	PMID:27760051
Cellular Component	GO:0005634	nucleus	Tug1	IDA		Mouse	PMID:26048247
Cellular Component	GO:0005634	nucleus	Tug1	IDA		Mouse	PMID:27760051
Cellular Component	GO:0005634	nucleus	Tug1	IDA		Mouse	PMID:32894169
Biological Process	GO:0007005	mitochondrion organization	Tug1	IMP		Mouse	PMID:27760051
Biological Process	GO:0007005	mitochondrion organization	Tug1	IDA		Mouse	PMID:27760051
Biological Process	GO:0042461	photoreceptor cell development	Tug1	IMP		Mouse	PMID:15797018
Biological Process	GO:0010628	positive regulation of gene expression	Tug1	IMP		Mouse	PMID:27760051
Biological Process	GO:0010628	positive regulation of gene expression	Tug1	IDA		Mouse	PMID:27760051
Biological Process	GO:0010468	regulation of gene expression	Tug1	IMP	MGI:MGI:5902984	Mouse	PMID:32894169
Biological Process	GO:0010468	regulation of gene expression	Tug1	IMP		Mouse	PMID:26034286
Biological Process	GO:0007283	spermatogenesis	Tug1	IMP	MGI:MGI:5902984	Mouse	PMID:32894169

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern