Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes TULP1
  • Mouse genes Tulp1
  • Rat genes Tulp1
  • Zfish genes tulp1a,tulp1b
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Tulp1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0051015	actin filament binding	TULP1	IDA		Human	PMID:16303976
Molecular Function	GO:0005546	phosphatidylinositol-4,5-bisphosphate binding	TULP1	IDA		Human	PMID:16303976
Molecular Function	GO:0005515	protein binding	TULP1	IPI	UniProtKB:P16333	Human	PMID:17474147
Molecular Function	GO:0005515	protein binding	Tulp1	IPI	UniProtKB:P50586	Mouse	MGI:MGI:4441109|PMID:19837063
Molecular Function	GO:0005515	protein binding	Tulp1	IPI	PR:P14873	Mouse	PMID:24664738
Molecular Function	GO:0005515	protein binding	Tulp1	IPI	PR:P39053	Mouse	PMID:23746204
Cellular Component	GO:0043679	axon terminus	Tulp1	IDA		Mouse	PMID:11481257
Cellular Component	GO:0042995	cell projection	TULP1	IDA		Human	PMID:16303976
Cellular Component	GO:0005829	cytosol	Tulp1	IDA		Mouse	PMID:11481257
Cellular Component	GO:0005576	extracellular region	Tulp1	IDA		Mouse	PMID:19695251
Cellular Component	GO:0001917	photoreceptor inner segment	Tulp1	IDA		Mouse	MGI:MGI:4397555|PMID:19218615
Cellular Component	GO:0001917	photoreceptor inner segment	Tulp1	IDA		Mouse	PMID:17525220
Cellular Component	GO:0001917	photoreceptor inner segment	Tulp1	IDA		Mouse	PMID:10549638
Cellular Component	GO:0001917	photoreceptor inner segment	Tulp1	IDA		Mouse	PMID:11481257
Cellular Component	GO:0001750	photoreceptor outer segment	Tulp1	IDA		Mouse	MGI:MGI:4397555|PMID:19218615
Cellular Component	GO:0005886	plasma membrane	TULP1	IDA		Human	PMID:16303976
Cellular Component	GO:0045202	synapse	Tulp1	IDA		Mouse	MGI:MGI:4397555|PMID:19218615
Biological Process	GO:0062139	camera-type eye photoreceptor cell development	tulp1a	IMP	ZFIN:ZDB-GENO-221212-1	Zfish	PMID:36396940
Biological Process	GO:0062139	camera-type eye photoreceptor cell development	tulp1a	IGI	ZFIN:ZDB-GENO-221212-3	Zfish	PMID:36396940
Biological Process	GO:0062139	camera-type eye photoreceptor cell development	tulp1b	IGI	ZFIN:ZDB-GENO-221212-3	Zfish	PMID:36396940
Biological Process	GO:0062139	camera-type eye photoreceptor cell development	tulp1b	IMP	ZFIN:ZDB-GENO-221212-2	Zfish	PMID:36396940
Biological Process	GO:0016358	dendrite development	Tulp1	IMP		Mouse	MGI:MGI:4397555|PMID:19218615
Biological Process	GO:0050908	detection of light stimulus involved in visual perception	TULP1	IMP		Human	PMID:15557452
Biological Process	GO:0042462	eye photoreceptor cell development	Tulp1	IMP		Mouse	MGI:MGI:4397555|PMID:19218615
Biological Process	GO:0006910	phagocytosis, recognition	Tulp1	IDA		Mouse	PMID:20978472
Biological Process	GO:0006910	phagocytosis, recognition	Tulp1	IMP	MGI:MGI:1859921	Mouse	PMID:19837063
Biological Process	GO:0045494	photoreceptor cell maintenance	Tulp1	IMP		Mouse	MGI:MGI:4397555|PMID:19218615
Biological Process	GO:0045494	photoreceptor cell maintenance	Tulp1	IMP	MGI:MGI:1859921	Mouse	PMID:10549638
Biological Process	GO:0045494	photoreceptor cell maintenance	Tulp1	IMP	MGI:MGI:1859921	Mouse	PMID:17525220
Biological Process	GO:0045494	photoreceptor cell maintenance	Tulp1	IMP	MGI:MGI:4867883	Mouse	PMID:22183357
Biological Process	GO:0045494	photoreceptor cell maintenance	Tulp1	IMP	MGI:MGI:1857081	Mouse	PMID:10607826
Biological Process	GO:0050766	positive regulation of phagocytosis	TULP1	IDA		Human	PMID:19837063
Biological Process	GO:1903546	protein localization to photoreceptor outer segment	Tulp1	IMP	MGI:MGI:1859921	Mouse	PMID:21867699
Biological Process	GO:1903546	protein localization to photoreceptor outer segment	Tulp1	IMP	MGI:MGI:1859921	Mouse	PMID:24664738
Biological Process	GO:1903546	protein localization to photoreceptor outer segment	Tulp1	IMP	MGI:MGI:1859921	Mouse	PMID:11481257
Biological Process	GO:1903546	protein localization to photoreceptor outer segment	Tulp1	IMP	MGI:MGI:1859921	Mouse	PMID:22183407
Biological Process	GO:1902017	regulation of cilium assembly	tulp1a	IGI	ZFIN:ZDB-GENO-221212-3	Zfish	PMID:36396940
Biological Process	GO:1902017	regulation of cilium assembly	tulp1b	IGI	ZFIN:ZDB-GENO-221212-3	Zfish	PMID:36396940
Biological Process	GO:0110075	regulation of ferroptosis	tulp1a	IGI	ZFIN:ZDB-GENO-221212-3	Zfish	PMID:36396940
Biological Process	GO:0110075	regulation of ferroptosis	tulp1b	IGI	ZFIN:ZDB-GENO-221212-3	Zfish	PMID:36396940
Biological Process	GO:0061074	regulation of neural retina development	tulp1a	IMP	ZFIN:ZDB-GENO-221212-1	Zfish	PMID:36396940
Biological Process	GO:0061074	regulation of neural retina development	tulp1b	IGI	ZFIN:ZDB-GENO-221212-3	Zfish	PMID:36396940
Biological Process	GO:0061074	regulation of neural retina development	tulp1b	IMP	ZFIN:ZDB-GENO-221212-2	Zfish	PMID:36396940
Biological Process	GO:0061074	regulation of neural retina development	tulp1a	IGI	ZFIN:ZDB-GENO-221212-3	Zfish	PMID:36396940
Biological Process	GO:0060041	retina development in camera-type eye	Tulp1	IMP		Mouse	PMID:21052544
Biological Process	GO:0001895	retina homeostasis	TULP1	IMP		Human	PMID:15557452
Biological Process	GO:0016192	vesicle-mediated transport	Tulp1	IMP	MGI:MGI:1859921	Mouse	PMID:10549638

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern