Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes TULP3
  • Mouse genes Tulp3
  • Rat genes Tulp3
  • Zfish genes tulp3
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Tulp3

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0019899	enzyme binding	TULP3	IPI	UniProtKB:Q96EB6	Human	PMID:23382074
Molecular Function	GO:0001664	G protein-coupled receptor binding	TULP3	IDA		Human	PMID:28154160
Molecular Function	GO:0120160	intraciliary transport particle A binding	TULP3	IDA		Human	PMID:20889716
Molecular Function	GO:0120160	intraciliary transport particle A binding	TULP3	IDA		Human	PMID:27932497
Molecular Function	GO:0120160	intraciliary transport particle A binding	TULP3	IDA		Human	PMID:28154160
Molecular Function	GO:0035091	phosphatidylinositol binding	TULP3	IDA		Human	PMID:20889716
Molecular Function	GO:0005515	protein binding	TULP3	IPI	UniProtKB:P12520	Human	PMID:22190034
Molecular Function	GO:0005515	protein binding	TULP3	IPI	UniProtKB:O43586	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	TULP3	IPI	UniProtKB:P43360	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	TULP3	IPI	UniProtKB:P60370	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	TULP3	IPI	UniProtKB:P60409	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	TULP3	IPI	UniProtKB:Q6NXT1	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	TULP3	IPI	UniProtKB:Q9HAT0	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	TULP3	IPI	UniProtKB:Q6NXT1	Human	PMID:28514442
Molecular Function	GO:0005515	protein binding	TULP3	IPI	UniProtKB:Q93009	Human	PMID:28514442
Molecular Function	GO:0005515	protein binding	TULP3	IPI	UniProtKB:Q9BYV9	Human	PMID:28514442
Molecular Function	GO:0005515	protein binding	TULP3	IPI	UniProtKB:P43360	Human	PMID:31515488
Molecular Function	GO:0005515	protein binding	TULP3	IPI	UniProtKB:Q6NXT1	Human	PMID:31515488
Molecular Function	GO:0005515	protein binding	TULP3	IPI	UniProtKB:O43586	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TULP3	IPI	UniProtKB:O75031	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TULP3	IPI	UniProtKB:P43360	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TULP3	IPI	UniProtKB:Q6NXT1	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TULP3	IPI	UniProtKB:Q9BYV9	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	TULP3	IPI	UniProtKB:Q93009	Human	PMID:35044719
Molecular Function	GO:0044877	protein-containing complex binding	TULP3	IDA		Human	PMID:20889716
Cellular Component	GO:0097731	9+0 non-motile cilium	TULP3	IDA		Human	PMID:20889716
Cellular Component	GO:0005930	axoneme	Tulp3	IDA		Mouse	PMID:19286674
Cellular Component	GO:0097546	ciliary base	TULP3	IDA		Human	PMID:20889716
Cellular Component	GO:0005929	cilium	TULP3	IDA		Human	PMID:20889716
Cellular Component	GO:0005929	cilium	TULP3	IDA		Human	PMID:27932497
Cellular Component	GO:0005929	cilium	TULP3	IDA		Human	PMID:28154160
Cellular Component	GO:0005929	cilium	Tulp3	IDA		Mouse	MGI:MGI:4888042|PMID:21209331
Cellular Component	GO:0005929	cilium	Tulp3	IDA		Mouse	PMID:19286674
Cellular Component	GO:0005730	nucleolus	TULP3	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005654	nucleoplasm	TULP3	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005634	nucleus	TULP3	IDA		Human	PMID:20889716
Cellular Component	GO:0005886	plasma membrane	TULP3	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005886	plasma membrane	TULP3	IDA		Human	PMID:28154160
Biological Process	GO:0009952	anterior/posterior pattern specification	Tulp3	IMP	MGI:MGI:2388066	Mouse	PMID:19334287
Biological Process	GO:0060348	bone development	Tulp3	IMP	MGI:MGI:2388066	Mouse	PMID:11406614
Biological Process	GO:0007420	brain development	Tulp3	IMP	MGI:MGI:2388066	Mouse	PMID:19286674
Biological Process	GO:0007420	brain development	Tulp3	IMP	MGI:MGI:2388066	Mouse	PMID:11406614
Biological Process	GO:0060434	bronchus morphogenesis	Tulp3	IMP	MGI:MGI:2388066	Mouse	PMID:19286674
Biological Process	GO:0021953	central nervous system neuron differentiation	Tulp3	IMP	MGI:MGI:2388066	Mouse	PMID:19286674
Biological Process	GO:0021904	dorsal/ventral neural tube patterning	Tulp3	IMP	MGI:MGI:2388066	Mouse	PMID:19286674
Biological Process	GO:0031076	embryonic camera-type eye development	Tulp3	IMP	MGI:MGI:2388066	Mouse	PMID:19286674
Biological Process	GO:0042733	embryonic digit morphogenesis	Tulp3	IMP	MGI:MGI:2388066	Mouse	PMID:19286674
Biological Process	GO:0042733	embryonic digit morphogenesis	Tulp3	IMP	MGI:MGI:2388066	Mouse	PMID:19334287
Biological Process	GO:0048702	embryonic neurocranium morphogenesis	Tulp3	IMP	MGI:MGI:2388066	Mouse	PMID:19286674
Biological Process	GO:0061548	ganglion development	Tulp3	IMP	MGI:MGI:2388066	Mouse	PMID:11406614
Biological Process	GO:0060173	limb development	Tulp3	IMP	MGI:MGI:3664273	Mouse	PMID:19223390
Biological Process	GO:0060173	limb development	Tulp3	IGI	MGI:MGI:98297	Mouse	PMID:19223390
Biological Process	GO:0045879	negative regulation of smoothened signaling pathway	TULP3	IDA		Human	PMID:20889716
Biological Process	GO:0045879	negative regulation of smoothened signaling pathway	Tulp3	IMP	MGI:MGI:3664273	Mouse	PMID:19223390
Biological Process	GO:0045879	negative regulation of smoothened signaling pathway	Tulp3	IMP	MGI:MGI:2388066	Mouse	PMID:19334287
Biological Process	GO:1901621	negative regulation of smoothened signaling pathway involved in dorsal/ventral neural tube patterning	Tulp3	IMP	MGI:MGI:2388066	Mouse	PMID:19334287
Biological Process	GO:0021914	negative regulation of smoothened signaling pathway involved in ventral spinal cord patterning	Tulp3	IMP	MGI:MGI:2388066	Mouse	PMID:19286674
Biological Process	GO:0001843	neural tube closure	Tulp3	IMP	MGI:MGI:3664273	Mouse	PMID:19223390
Biological Process	GO:0021915	neural tube development	Tulp3	IMP	MGI:MGI:2388066	Mouse	PMID:19286674
Biological Process	GO:0001841	neural tube formation	Tulp3	IMP	MGI:MGI:2388066	Mouse	PMID:11406614
Biological Process	GO:0061512	protein localization to cilium	TULP3	IGI	MGI:MGI:1891217	Human	PMID:27727273
Biological Process	GO:0061512	protein localization to cilium	TULP3	IMP		Human	PMID:27727273
Biological Process	GO:0061512	protein localization to cilium	TULP3	IDA		Human	PMID:28154160
Biological Process	GO:0061512	protein localization to cilium	TULP3	IMP		Human	PMID:28154160
Biological Process	GO:0061512	protein localization to cilium	Tulp3	IMP		Mouse	MGI:MGI:6383338|PMID:31761534
Biological Process	GO:0061512	protein localization to cilium	Tulp3	IMP		Mouse	PMID:28154160
Biological Process	GO:0008277	regulation of G protein-coupled receptor signaling pathway	TULP3	IDA		Human	PMID:28154160
Biological Process	GO:0008277	regulation of G protein-coupled receptor signaling pathway	TULP3	IMP		Human	PMID:28154160
Biological Process	GO:0008277	regulation of G protein-coupled receptor signaling pathway	TULP3	IDA		Human	PMID:20889716
Biological Process	GO:0008277	regulation of G protein-coupled receptor signaling pathway	Tulp3	IMP		Mouse	PMID:28154160
Biological Process	GO:0008589	regulation of smoothened signaling pathway	Tulp3	IMP	MGI:MGI:2388066	Mouse	PMID:19286674
Biological Process	GO:0007224	smoothened signaling pathway	Tulp3	IMP	MGI:MGI:3664273	Mouse	PMID:19223390
Biological Process	GO:0060831	smoothened signaling pathway involved in dorsal/ventral neural tube patterning	Tulp3	IMP	MGI:MGI:3664273	Mouse	PMID:19223390

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern