Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes UBA6
  • Mouse genes Uba6
  • Rat genes Uba6
  • Zfish genes uba6
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Uba6

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0019780	FAT10 activating enzyme activity	UBA6	IMP		Human	PMID:17889673
Molecular Function	GO:0019780	FAT10 activating enzyme activity	Uba6	IMP		Mouse	MGI:MGI:3813523|PMID:17889673
Molecular Function	GO:0005515	protein binding	UBA6	IPI	UniProtKB:O15205	Human	PMID:17889673
Molecular Function	GO:0005515	protein binding	UBA6	IPI	UniProtKB:Q6NT76	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	UBA6	IPI	UniProtKB:O15205	Human	PMID:25422469
Molecular Function	GO:0005515	protein binding	Uba6	IPI	UniProtKB:P63072	Mouse	MGI:MGI:3813523|PMID:17889673
Molecular Function	GO:0004839	ubiquitin activating enzyme activity	Uba6	IMP		Mouse	PMID:23499007
Cellular Component	GO:0005737	cytoplasm	UBA6	IDA		Human	GO_REF:0000054
Biological Process	GO:0021764	amygdala development	Uba6	IMP	MGI:MGI:2176173,MGI:MGI:5509054	Mouse	PMID:23499007
Biological Process	GO:0060996	dendritic spine development	Uba6	IMP	MGI:MGI:2176173,MGI:MGI:5509054	Mouse	PMID:23499007
Biological Process	GO:0021766	hippocampus development	Uba6	IMP	MGI:MGI:2176173,MGI:MGI:5509054	Mouse	PMID:23499007
Biological Process	GO:0007612	learning	Uba6	IMP	MGI:MGI:2176173,MGI:MGI:5509054	Mouse	PMID:23499007
Biological Process	GO:0007626	locomotory behavior	Uba6	IMP	MGI:MGI:2176173,MGI:MGI:5509054	Mouse	PMID:23499007
Biological Process	GO:0016567	protein ubiquitination	UBA6	IMP		Human	PMID:17889673
Biological Process	GO:0016567	protein ubiquitination	Uba6	IMP		Mouse	MGI:MGI:3813523|PMID:17889673
Biological Process	GO:0006511	ubiquitin-dependent protein catabolic process	UBA6	IMP		Human	PMID:17889673
Biological Process	GO:0006511	ubiquitin-dependent protein catabolic process	Uba6	IMP		Mouse	MGI:MGI:3813523|PMID:17889673
Biological Process	GO:0006511	ubiquitin-dependent protein catabolic process	Uba6	IGI	MGI:MGI:1343160	Mouse	PMID:23499007

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern