Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes UBB
  • Mouse genes Ubb
  • Rat genes Ubb
  • Zfish genes si:ch211-202a12.4,ubb
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Ubb

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	UBB	IPI	UniProtKB:O95630	Human	PMID:14755250
Molecular Function	GO:0005515	protein binding	UBB	IPI	UniProtKB:Q9HAU4	Human	PMID:14755250
Molecular Function	GO:0005515	protein binding	UBB	IPI	UniProtKB:Q9Y3C5	Human	PMID:14755250
Molecular Function	GO:0005515	protein binding	UBB	IPI	UniProtKB:Q60592	Human	PMID:14764729
Molecular Function	GO:0005515	protein binding	UBB	IPI	UniProtKB:Q9NZ52	Human	PMID:15039775
Molecular Function	GO:0005515	protein binding	UBB	IPI	UniProtKB:Q9UJY5	Human	PMID:15143060
Molecular Function	GO:0005515	protein binding	UBB	IPI	UniProtKB:Q60592	Human	PMID:15308666
Molecular Function	GO:0005515	protein binding	UBB	IPI	UniProtKB:Q15038	Human	PMID:16189514
Molecular Function	GO:0005515	protein binding	UBB	IPI	UniProtKB:P28562	Human	PMID:16286470
Molecular Function	GO:0005515	protein binding	UBB	IPI	UniProtKB:Q9UJ41	Human	PMID:16499958
Molecular Function	GO:0005515	protein binding	UBB	IPI	UniProtKB:P33993	Human	PMID:17310990
Molecular Function	GO:0005515	protein binding	UBB	IPI	UniProtKB:P24610	Human	PMID:17662948
Molecular Function	GO:0005515	protein binding	UBB	IPI	UniProtKB:P54727	Human	PMID:17662948
Molecular Function	GO:0005515	protein binding	UBB	IPI	UniProtKB:P46934	Human	PMID:17719543
Molecular Function	GO:0005515	protein binding	UBB	IPI	UniProtKB:Q9HAU4	Human	PMID:17719543
Molecular Function	GO:0005515	protein binding	UBB	IPI	UniProtKB:Q8IVM0	Human	PMID:18029035
Molecular Function	GO:0005515	protein binding	UBB	IPI	UniProtKB:Q68DV7	Human	PMID:18313049
Molecular Function	GO:0005515	protein binding	UBB	IPI	UniProtKB:Q9DLK6	Human	PMID:20924359
Molecular Function	GO:0005515	protein binding	UBB	IPI	UniProtKB:Q15038	Human	PMID:21516116
Molecular Function	GO:0005515	protein binding	UBB	IPI	UniProtKB:P46934	Human	PMID:24981860
Molecular Function	GO:0005515	protein binding	UBB	IPI	UniProtKB:Q9BSL1	Human	PMID:28514442
Molecular Function	GO:0005515	protein binding	UBB	IPI	UniProtKB:Q9Y3C5	Human	PMID:28514442
Molecular Function	GO:0005515	protein binding	UBB	IPI	UniProtKB:O00560	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	UBB	IPI	UniProtKB:P54727	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	UBB	IPI	UniProtKB:Q15038	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	UBB	IPI	UniProtKB:Q6ICB0	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	UBB	IPI	UniProtKB:Q86VP1	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	UBB	IPI	UniProtKB:Q8N3F0	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	UBB	IPI	UniProtKB:Q96CS7	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	UBB	IPI	UniProtKB:Q9BSL1	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	UBB	IPI	UniProtKB:Q9H305	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	UBB	IPI	UniProtKB:Q9NRQ2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	UBB	IPI	UniProtKB:Q9UHD9	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	UBB	IPI	UniProtKB:O60260-5	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	UBB	IPI	UniProtKB:O75886	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	UBB	IPI	UniProtKB:O95630	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	UBB	IPI	UniProtKB:P00441	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	UBB	IPI	UniProtKB:P05067	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	UBB	IPI	UniProtKB:P45974-2	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	UBB	IPI	UniProtKB:Q6GQQ9-2	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	UBB	IPI	UniProtKB:Q8N488	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	UBB	IPI	UniProtKB:Q8NA23-2	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	UBB	IPI	UniProtKB:Q96FW1	Human	PMID:32814053
Cellular Component	GO:0070062	extracellular exosome	UBB	HDA		Human	PMID:23533145
Cellular Component	GO:0005615	extracellular space	UBB	HDA		Human	PMID:16502470
Cellular Component	GO:0031315	extrinsic component of mitochondrial outer membrane	UBB	IDA		Human	PMID:24751536
Cellular Component	GO:0005739	mitochondrion	UBB	IDA		Human	PMID:17571083
Cellular Component	GO:0043209	myelin sheath	Ubb	HDA		Mouse	MGI:MGI:3834050|PMID:17634366
Cellular Component	GO:0043005	neuron projection	UBB	IDA		Human	PMID:17571083
Cellular Component	GO:0043025	neuronal cell body	UBB	IDA		Human	PMID:17571083
Cellular Component	GO:0005634	nucleus	UBB	HDA		Human	PMID:21630459
Cellular Component	GO:0031982	vesicle	UBB	HDA		Human	PMID:19190083
Biological Process	GO:0060612	adipose tissue development	Ubb	IMP	MGI:MGI:3774112	Mouse	PMID:18299572
Biological Process	GO:0097009	energy homeostasis	Ubb	IMP	MGI:MGI:3774112	Mouse	PMID:18299572
Biological Process	GO:0060613	fat pad development	Ubb	IMP	MGI:MGI:3774112	Mouse	PMID:18299572
Biological Process	GO:0008585	female gonad development	Ubb	IMP	MGI:MGI:3774112	Mouse	PMID:18070917
Biological Process	GO:0007144	female meiosis I	Ubb	IMP	MGI:MGI:3774112	Mouse	PMID:18070917
Biological Process	GO:0021888	hypothalamus gonadotrophin-releasing hormone neuron development	Ubb	IMP	MGI:MGI:3774112	Mouse	PMID:18299572
Biological Process	GO:0008584	male gonad development	Ubb	IMP	MGI:MGI:3774112	Mouse	PMID:18070917
Biological Process	GO:0007141	male meiosis I	Ubb	IMP	MGI:MGI:3774112	Mouse	PMID:18070917
Biological Process	GO:0047497	mitochondrion transport along microtubule	UBB	IDA		Human	PMID:17571083
Biological Process	GO:0048812	neuron projection morphogenesis	UBB	IMP		Human	PMID:17571083
Biological Process	GO:1902255	positive regulation of intrinsic apoptotic signaling pathway by p53 class mediator	UBB	IDA		Human	PMID:17571083
Biological Process	GO:1902527	positive regulation of protein monoubiquitination	UBB	IMP		Human	PMID:24660806
Biological Process	GO:0031398	positive regulation of protein ubiquitination	UBB	IDA		Human	PMID:24660806
Biological Process	GO:0051881	regulation of mitochondrial membrane potential	UBB	IDA		Human	PMID:17571083
Biological Process	GO:1901214	regulation of neuron death	UBB	IDA		Human	PMID:17571083
Biological Process	GO:0061136	regulation of proteasomal protein catabolic process	UBB	IDA		Human	PMID:17571083
Biological Process	GO:0072520	seminiferous tubule development	Ubb	IMP	MGI:MGI:3774112	Mouse	PMID:18070917

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern